Gene : PHC56 C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g654600 Defline:  (1 of 3) KOG4462 - WASP-interacting protein VRP1/WIP, contains WH2 domain
Genomic Order:  280 Name:  ? Cre16.g654600
Secondary Identifier:  ? PAC:30777676
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g654600 0.5kb upstream 0.5kb upstream 16475 true chromosome_16: 1662176-1678650 Chlamydomonas reinhardtii
Cre16.g654600 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 1662176-1662675 Chlamydomonas reinhardtii
Cre16.g654600 0.5kb downstream 0.5kb downstream 16475 true chromosome_16: 1662676-1679150 Chlamydomonas reinhardtii
Cre16.g654600 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 1678651-1679150 Chlamydomonas reinhardtii
Cre16.g654600 1.0kb upstream 1.0kb upstream 16975 true chromosome_16: 1661676-1678650 Chlamydomonas reinhardtii
Cre16.g654600 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 1661676-1662675 Chlamydomonas reinhardtii
Cre16.g654600 1.0kb downstream 1.0kb downstream 16975 true chromosome_16: 1662676-1679650 Chlamydomonas reinhardtii
Cre16.g654600 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 1678651-1679650 Chlamydomonas reinhardtii
Cre16.g654600 2.0kb upstream 2.0kb upstream 17975 true chromosome_16: 1660676-1678650 Chlamydomonas reinhardtii
Cre16.g654600 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 1660676-1662675 Chlamydomonas reinhardtii
Cre16.g654600 2.0kb downstream 2.0kb downstream 17975 true chromosome_16: 1662676-1680650 Chlamydomonas reinhardtii
Cre16.g654600 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 1678651-1680650 Chlamydomonas reinhardtii
Cre16.g654600 5.0kb upstream 5.0kb upstream 20975 true chromosome_16: 1657676-1678650 Chlamydomonas reinhardtii
Cre16.g654600 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 1657676-1662675 Chlamydomonas reinhardtii
Cre16.g654600 5.0kb downstream 5.0kb downstream 20975 true chromosome_16: 1662676-1683650 Chlamydomonas reinhardtii
Cre16.g654600 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 1678651-1683650 Chlamydomonas reinhardtii
Cre16.g654600 10.0kb upstream 10.0kb upstream 25975 true chromosome_16: 1652676-1678650 Chlamydomonas reinhardtii
Cre16.g654600 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 1652676-1662675 Chlamydomonas reinhardtii
Cre16.g654600 10.0kb downstream 10.0kb downstream 25975 true chromosome_16: 1662676-1688650 Chlamydomonas reinhardtii
Cre16.g654600 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 1678651-1688650 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081822 5260 Chlorophyte View MSA
123399528 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.89        
cufflinks 1.743        
cufflinks 0.805        
cufflinks 1.094        
cufflinks 1.569        
cufflinks 0.942        
cufflinks 1.045        
cufflinks 0.915        
cufflinks 1.799        
cufflinks 0.24       Low
cufflinks 1.254        
cufflinks 1.663        
cufflinks 0.327       Low
cufflinks 1.588        
cufflinks 1.347        
cufflinks 1.434        
cufflinks 1.958        
cufflinks 1.059        
cufflinks 0.156       Low
cufflinks 0.988        
cufflinks 1.421        
cufflinks 1.953        
cufflinks 1.048        
cufflinks 0.861        
cufflinks 2.175       High
cufflinks 7.94049 0.344091 15.5369   High
cufflinks 12.2997 3.12781 21.4716    
cufflinks 5.55434 0.0 11.1643    
cufflinks 8.40501 0.33314 16.4769    
cufflinks 21.3385 1.4152 41.2618    

0 Strain