Gene : RSP23 C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g654300 Defline:  (1 of 1) PF00334//PF00612//PF05186 - Nucleoside diphosphate kinase (NDK) // IQ calmodulin-binding motif (IQ) // Dpy-30 motif (Dpy-30)
Genomic Order:  273 Name:  ? Cre16.g654300
Secondary Identifier:  ? PAC:30778202
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Sequence Feature Displayer

Ontology Annotation Displayer

20 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY0-162 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-6126 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-6545 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7176 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7184 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7196 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7197 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7200 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7205 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7208 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7210 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7211 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7220 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7221 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7222 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7226 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7227 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7228 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7229 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-841 Chlamydomonas reinhardtii pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g654300 0.5kb upstream 0.5kb upstream 3407 true chromosome_16: 1627000-1630406 Chlamydomonas reinhardtii
Cre16.g654300 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 1629907-1630406 Chlamydomonas reinhardtii
Cre16.g654300 0.5kb downstream 0.5kb downstream 3407 true chromosome_16: 1626500-1629906 Chlamydomonas reinhardtii
Cre16.g654300 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 1626500-1626999 Chlamydomonas reinhardtii
Cre16.g654300 1.0kb upstream 1.0kb upstream 3907 true chromosome_16: 1627000-1630906 Chlamydomonas reinhardtii
Cre16.g654300 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 1629907-1630906 Chlamydomonas reinhardtii
Cre16.g654300 1.0kb downstream 1.0kb downstream 3907 true chromosome_16: 1626000-1629906 Chlamydomonas reinhardtii
Cre16.g654300 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 1626000-1626999 Chlamydomonas reinhardtii
Cre16.g654300 2.0kb upstream 2.0kb upstream 4907 true chromosome_16: 1627000-1631906 Chlamydomonas reinhardtii
Cre16.g654300 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 1629907-1631906 Chlamydomonas reinhardtii
Cre16.g654300 2.0kb downstream 2.0kb downstream 4907 true chromosome_16: 1625000-1629906 Chlamydomonas reinhardtii
Cre16.g654300 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 1625000-1626999 Chlamydomonas reinhardtii
Cre16.g654300 5.0kb upstream 5.0kb upstream 7907 true chromosome_16: 1627000-1634906 Chlamydomonas reinhardtii
Cre16.g654300 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 1629907-1634906 Chlamydomonas reinhardtii
Cre16.g654300 5.0kb downstream 5.0kb downstream 7907 true chromosome_16: 1622000-1629906 Chlamydomonas reinhardtii
Cre16.g654300 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 1622000-1626999 Chlamydomonas reinhardtii
Cre16.g654300 10.0kb upstream 10.0kb upstream 12907 true chromosome_16: 1627000-1639906 Chlamydomonas reinhardtii
Cre16.g654300 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 1629907-1639906 Chlamydomonas reinhardtii
Cre16.g654300 10.0kb downstream 10.0kb downstream 12907 true chromosome_16: 1617000-1629906 Chlamydomonas reinhardtii
Cre16.g654300 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 1617000-1626999 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109873 5260 Chlorophyte View MSA
123423008 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.908       Low
cufflinks 11.358        
cufflinks 28.819     High High
cufflinks 39.335     High High
cufflinks 7.146        
cufflinks 7.983        
cufflinks 7.288        
cufflinks 15.922     High  
cufflinks 4.378        
cufflinks 4.535        
cufflinks 66.162     High High
cufflinks 11.487        
cufflinks 6.593        
cufflinks 8.562        
cufflinks 26.084     High High
cufflinks 2.517       Low
cufflinks 4.536        
cufflinks 15.298     High  
cufflinks 5.048        
cufflinks 9.338        
cufflinks 21.86     High  
cufflinks 4.343        
cufflinks 7.455        
cufflinks 20.36     High  
cufflinks 2.661       Low
cufflinks 3.79003 0.558481 7.02158    
cufflinks 12.7271 3.40791 22.0463    
cufflinks 22.2457 0.0 44.7894    
cufflinks 8.12904 1.28976 14.9683    
cufflinks 14.7045 2.88631 26.5227    

0 Strain