Gene : MST1 C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g650600 Defline:  (1 of 8) PF07699 - GCC2 and GCC3 (GCC2_GCC3)
Genomic Order:  195 Name:  ? Cre16.g650600
Secondary Identifier:  ? PAC:30777876
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g650600 0.5kb upstream 0.5kb upstream 9925 true chromosome_16: 1169953-1179877 Chlamydomonas reinhardtii
Cre16.g650600 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 1179378-1179877 Chlamydomonas reinhardtii
Cre16.g650600 0.5kb downstream 0.5kb downstream 9925 true chromosome_16: 1169453-1179377 Chlamydomonas reinhardtii
Cre16.g650600 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 1169453-1169952 Chlamydomonas reinhardtii
Cre16.g650600 1.0kb upstream 1.0kb upstream 10425 true chromosome_16: 1169953-1180377 Chlamydomonas reinhardtii
Cre16.g650600 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 1179378-1180377 Chlamydomonas reinhardtii
Cre16.g650600 1.0kb downstream 1.0kb downstream 10425 true chromosome_16: 1168953-1179377 Chlamydomonas reinhardtii
Cre16.g650600 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 1168953-1169952 Chlamydomonas reinhardtii
Cre16.g650600 2.0kb upstream 2.0kb upstream 11425 true chromosome_16: 1169953-1181377 Chlamydomonas reinhardtii
Cre16.g650600 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 1179378-1181377 Chlamydomonas reinhardtii
Cre16.g650600 2.0kb downstream 2.0kb downstream 11425 true chromosome_16: 1167953-1179377 Chlamydomonas reinhardtii
Cre16.g650600 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 1167953-1169952 Chlamydomonas reinhardtii
Cre16.g650600 5.0kb upstream 5.0kb upstream 14425 true chromosome_16: 1169953-1184377 Chlamydomonas reinhardtii
Cre16.g650600 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 1179378-1184377 Chlamydomonas reinhardtii
Cre16.g650600 5.0kb downstream 5.0kb downstream 14425 true chromosome_16: 1164953-1179377 Chlamydomonas reinhardtii
Cre16.g650600 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 1164953-1169952 Chlamydomonas reinhardtii
Cre16.g650600 10.0kb upstream 10.0kb upstream 19425 true chromosome_16: 1169953-1189377 Chlamydomonas reinhardtii
Cre16.g650600 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 1179378-1189377 Chlamydomonas reinhardtii
Cre16.g650600 10.0kb downstream 10.0kb downstream 19425 true chromosome_16: 1159953-1179377 Chlamydomonas reinhardtii
Cre16.g650600 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 1159953-1169952 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124077379 5260 Chlorophyte Singleton cluster - no MSA
123395390 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.707     High  
cufflinks 52.893     High  
cufflinks 80.367     High  
cufflinks 114.485     High High
cufflinks 37.97     High  
cufflinks 34.647     High  
cufflinks 41.787     High  
cufflinks 48.952     High  
cufflinks 12.48     High Low
cufflinks 7.926     High Low
cufflinks 207.181     High High
cufflinks 52.467     High  
cufflinks 6.256       Low
cufflinks 47.322     High  
cufflinks 63.595     High  
cufflinks 19.883     High  
cufflinks 19.288     High  
cufflinks 51.983     High  
cufflinks 4.924       Low
cufflinks 41.112     High  
cufflinks 68.815     High  
cufflinks 19.258     High  
cufflinks 36.671     High  
cufflinks 60.065     High  
cufflinks 14.833     High  
cufflinks 106.636 1.74946 211.523 High High
cufflinks 95.4661 12.1363 178.796 High  
cufflinks 178.18 0.0 379.524 High  
cufflinks 83.632 0.0 167.87 High Low
cufflinks 183.983 3.92381 364.042 High  

0 Strain