Gene : CAV6 C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g667350 Defline:  (1 of 3) PTHR10037//PTHR10037:SF62 - VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM // SODIUM CHANNEL PROTEIN PARA
Genomic Order:  739 Name:  ? Cre16.g667350
Secondary Identifier:  ? PAC:30778190
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g667350 0.5kb upstream 0.5kb upstream 19572 true chromosome_16: 4495599-4515170 Chlamydomonas reinhardtii
Cre16.g667350 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 4495599-4496098 Chlamydomonas reinhardtii
Cre16.g667350 0.5kb downstream 0.5kb downstream 19572 true chromosome_16: 4496099-4515670 Chlamydomonas reinhardtii
Cre16.g667350 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 4515171-4515670 Chlamydomonas reinhardtii
Cre16.g667350 1.0kb upstream 1.0kb upstream 20072 true chromosome_16: 4495099-4515170 Chlamydomonas reinhardtii
Cre16.g667350 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 4495099-4496098 Chlamydomonas reinhardtii
Cre16.g667350 1.0kb downstream 1.0kb downstream 20072 true chromosome_16: 4496099-4516170 Chlamydomonas reinhardtii
Cre16.g667350 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 4515171-4516170 Chlamydomonas reinhardtii
Cre16.g667350 2.0kb upstream 2.0kb upstream 21072 true chromosome_16: 4494099-4515170 Chlamydomonas reinhardtii
Cre16.g667350 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 4494099-4496098 Chlamydomonas reinhardtii
Cre16.g667350 2.0kb downstream 2.0kb downstream 21072 true chromosome_16: 4496099-4517170 Chlamydomonas reinhardtii
Cre16.g667350 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 4515171-4517170 Chlamydomonas reinhardtii
Cre16.g667350 5.0kb upstream 5.0kb upstream 24072 true chromosome_16: 4491099-4515170 Chlamydomonas reinhardtii
Cre16.g667350 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 4491099-4496098 Chlamydomonas reinhardtii
Cre16.g667350 5.0kb downstream 5.0kb downstream 24072 true chromosome_16: 4496099-4520170 Chlamydomonas reinhardtii
Cre16.g667350 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 4515171-4520170 Chlamydomonas reinhardtii
Cre16.g667350 10.0kb upstream 10.0kb upstream 29072 true chromosome_16: 4486099-4515170 Chlamydomonas reinhardtii
Cre16.g667350 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 4486099-4496098 Chlamydomonas reinhardtii
Cre16.g667350 10.0kb downstream 10.0kb downstream 29072 true chromosome_16: 4496099-4525170 Chlamydomonas reinhardtii
Cre16.g667350 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 4515171-4525170 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076553 5260 Chlorophyte View MSA
123394638 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.351       Low
cufflinks 0.785        
cufflinks 1.171        
cufflinks 1.341       High
cufflinks 0.626        
cufflinks 0.731        
cufflinks 0.702        
cufflinks 1.048        
cufflinks 0.488       Low
cufflinks 0.41       Low
cufflinks 1.577       High
cufflinks 1.229        
cufflinks 0.518        
cufflinks 0.826        
cufflinks 1.066        
cufflinks 0.496       Low
cufflinks 0.943        
cufflinks 0.93        
cufflinks 0.268       Low
cufflinks 1.62       High
cufflinks 1.175        
cufflinks 0.893        
cufflinks 0.971        
cufflinks 1.041        
cufflinks 0.867        
cufflinks 1.37224 0.23314 2.51134   High
cufflinks 2.52493 0.657197 4.39267    
cufflinks 2.47773 0.0 4.99887    
cufflinks 2.18391 0.320854 4.04697   High
cufflinks 2.34412 0.46975 4.21848    

0 Strain