Gene : TLP3 C. reinhardtii v5.6
Primary Identifier:  ? Cre16.g667451 Defline:  (1 of 3) PTHR10037//PTHR10037:SF62 - VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM // SODIUM CHANNEL PROTEIN PARA
Genomic Order:  738 Name:  ? Cre16.g667451
Secondary Identifier:  ? PAC:30777477
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g667451 0.5kb upstream 0.5kb upstream 11659 true chromosome_16: 4483579-4495237 Chlamydomonas reinhardtii
Cre16.g667451 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 4483579-4484078 Chlamydomonas reinhardtii
Cre16.g667451 0.5kb downstream 0.5kb downstream 11659 true chromosome_16: 4484079-4495737 Chlamydomonas reinhardtii
Cre16.g667451 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 4495238-4495737 Chlamydomonas reinhardtii
Cre16.g667451 1.0kb upstream 1.0kb upstream 12159 true chromosome_16: 4483079-4495237 Chlamydomonas reinhardtii
Cre16.g667451 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 4483079-4484078 Chlamydomonas reinhardtii
Cre16.g667451 1.0kb downstream 1.0kb downstream 12159 true chromosome_16: 4484079-4496237 Chlamydomonas reinhardtii
Cre16.g667451 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 4495238-4496237 Chlamydomonas reinhardtii
Cre16.g667451 2.0kb upstream 2.0kb upstream 13159 true chromosome_16: 4482079-4495237 Chlamydomonas reinhardtii
Cre16.g667451 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 4482079-4484078 Chlamydomonas reinhardtii
Cre16.g667451 2.0kb downstream 2.0kb downstream 13159 true chromosome_16: 4484079-4497237 Chlamydomonas reinhardtii
Cre16.g667451 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 4495238-4497237 Chlamydomonas reinhardtii
Cre16.g667451 5.0kb upstream 5.0kb upstream 16159 true chromosome_16: 4479079-4495237 Chlamydomonas reinhardtii
Cre16.g667451 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 4479079-4484078 Chlamydomonas reinhardtii
Cre16.g667451 5.0kb downstream 5.0kb downstream 16159 true chromosome_16: 4484079-4500237 Chlamydomonas reinhardtii
Cre16.g667451 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 4495238-4500237 Chlamydomonas reinhardtii
Cre16.g667451 10.0kb upstream 10.0kb upstream 21159 true chromosome_16: 4474079-4495237 Chlamydomonas reinhardtii
Cre16.g667451 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 4474079-4484078 Chlamydomonas reinhardtii
Cre16.g667451 10.0kb downstream 10.0kb downstream 21159 true chromosome_16: 4484079-4505237 Chlamydomonas reinhardtii
Cre16.g667451 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 4495238-4505237 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124077244 5260 Chlorophyte Singleton cluster - no MSA
123395266 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.226        
cufflinks 0.674        
cufflinks 0.597        
cufflinks 0.74        
cufflinks 0.401        
cufflinks 0.377        
cufflinks 0.54        
cufflinks 0.71        
cufflinks 0.246        
cufflinks 0.033     Low Low
cufflinks 1.257       High
cufflinks 0.736        
cufflinks 0.075     Low Low
cufflinks 0.422        
cufflinks 0.588        
cufflinks 0.359        
cufflinks 0.797        
cufflinks 0.417        
cufflinks 0.099       Low
cufflinks 1.261       High
cufflinks 0.787        
cufflinks 0.395        
cufflinks 0.525        
cufflinks 0.741        
cufflinks 0.582        
cufflinks 3.18907 0.489753 5.88839   High
cufflinks 3.83787 0.982904 6.69283    
cufflinks 3.66999 0.0 7.42387    
cufflinks 4.2649 0.547136 7.98266   High
cufflinks 4.38854 0.880679 7.89641   Low

0 Strain