Gene : Cre16.g662951 C. reinhardtii v5.6
Defline:  (1 of 1) PF06985//PF12796//PF13637 - Heterokaryon incompatibility protein (HET) (HET) // Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) Genomic Order:  460
Name:  ? Cre16.g662951 Secondary Identifier:  ? PAC:30777372
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre16.g662951 0.5kb upstream 0.5kb upstream 19241 true chromosome_16: 2777420-2796660 Chlamydomonas reinhardtii
Cre16.g662951 0.5kb upstream 0.5kb upstream 500 false chromosome_16: 2777420-2777919 Chlamydomonas reinhardtii
Cre16.g662951 0.5kb downstream 0.5kb downstream 19241 true chromosome_16: 2777920-2797160 Chlamydomonas reinhardtii
Cre16.g662951 0.5kb downstream 0.5kb downstream 500 false chromosome_16: 2796661-2797160 Chlamydomonas reinhardtii
Cre16.g662951 1.0kb upstream 1.0kb upstream 19741 true chromosome_16: 2776920-2796660 Chlamydomonas reinhardtii
Cre16.g662951 1.0kb upstream 1.0kb upstream 1000 false chromosome_16: 2776920-2777919 Chlamydomonas reinhardtii
Cre16.g662951 1.0kb downstream 1.0kb downstream 19741 true chromosome_16: 2777920-2797660 Chlamydomonas reinhardtii
Cre16.g662951 1.0kb downstream 1.0kb downstream 1000 false chromosome_16: 2796661-2797660 Chlamydomonas reinhardtii
Cre16.g662951 2.0kb upstream 2.0kb upstream 20741 true chromosome_16: 2775920-2796660 Chlamydomonas reinhardtii
Cre16.g662951 2.0kb upstream 2.0kb upstream 2000 false chromosome_16: 2775920-2777919 Chlamydomonas reinhardtii
Cre16.g662951 2.0kb downstream 2.0kb downstream 20741 true chromosome_16: 2777920-2798660 Chlamydomonas reinhardtii
Cre16.g662951 2.0kb downstream 2.0kb downstream 2000 false chromosome_16: 2796661-2798660 Chlamydomonas reinhardtii
Cre16.g662951 5.0kb upstream 5.0kb upstream 23741 true chromosome_16: 2772920-2796660 Chlamydomonas reinhardtii
Cre16.g662951 5.0kb upstream 5.0kb upstream 5000 false chromosome_16: 2772920-2777919 Chlamydomonas reinhardtii
Cre16.g662951 5.0kb downstream 5.0kb downstream 23741 true chromosome_16: 2777920-2801660 Chlamydomonas reinhardtii
Cre16.g662951 5.0kb downstream 5.0kb downstream 5000 false chromosome_16: 2796661-2801660 Chlamydomonas reinhardtii
Cre16.g662951 10.0kb upstream 10.0kb upstream 28741 true chromosome_16: 2767920-2796660 Chlamydomonas reinhardtii
Cre16.g662951 10.0kb upstream 10.0kb upstream 10000 false chromosome_16: 2767920-2777919 Chlamydomonas reinhardtii
Cre16.g662951 10.0kb downstream 10.0kb downstream 28741 true chromosome_16: 2777920-2806660 Chlamydomonas reinhardtii
Cre16.g662951 10.0kb downstream 10.0kb downstream 10000 false chromosome_16: 2796661-2806660 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124078366 5260 Chlorophyte View MSA
123429169 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low Low
cufflinks 0.052     Low  
cufflinks 0.074     Low  
cufflinks 0.114     Low High
cufflinks 0.04     Low  
cufflinks 0.053     Low  
cufflinks 0.016     Low  
cufflinks 0.067     Low  
cufflinks 0.008     Low Low
cufflinks 0.019     Low  
cufflinks 0.079     Low  
cufflinks 0.047     Low  
cufflinks 0.037     Low  
cufflinks 0.037     Low  
cufflinks 0.061     Low  
cufflinks 0.016     Low  
cufflinks 0.035     Low  
cufflinks 0.1     Low High
cufflinks 0.005     Low Low
cufflinks 0.037     Low  
cufflinks 0.081     Low  
cufflinks 0.012     Low Low
cufflinks 0.05     Low  
cufflinks 0.075     Low  
cufflinks 0.037     Low  
cufflinks 0.0513358 0.0 0.121794 Low Low
cufflinks 0.33692 0.0 0.790617 Low Low
cufflinks 1.33133 0.0 2.88986    
cufflinks 0.146536 0.0 0.316295 Low  
cufflinks 1.13402 0.0996471 2.1684    

0 Strain