Gene : TSQ1 C. reinhardtii v5.6
Primary Identifier:  ? Cre14.g614900 Defline:  (1 of 1) 6.1.1.18 - Glutamine--tRNA ligase / Glutaminyl-tRNA synthetase
Genomic Order:  157 Name:  ? Cre14.g614900
Secondary Identifier:  ? PAC:30776597
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii TRNA-CHARGING-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre14.g614900 0.5kb upstream 0.5kb upstream 13468 true chromosome_14: 1085670-1099137 Chlamydomonas reinhardtii
Cre14.g614900 0.5kb upstream 0.5kb upstream 500 false chromosome_14: 1098638-1099137 Chlamydomonas reinhardtii
Cre14.g614900 0.5kb downstream 0.5kb downstream 13468 true chromosome_14: 1085170-1098637 Chlamydomonas reinhardtii
Cre14.g614900 0.5kb downstream 0.5kb downstream 500 false chromosome_14: 1085170-1085669 Chlamydomonas reinhardtii
Cre14.g614900 1.0kb upstream 1.0kb upstream 13968 true chromosome_14: 1085670-1099637 Chlamydomonas reinhardtii
Cre14.g614900 1.0kb upstream 1.0kb upstream 1000 false chromosome_14: 1098638-1099637 Chlamydomonas reinhardtii
Cre14.g614900 1.0kb downstream 1.0kb downstream 13968 true chromosome_14: 1084670-1098637 Chlamydomonas reinhardtii
Cre14.g614900 1.0kb downstream 1.0kb downstream 1000 false chromosome_14: 1084670-1085669 Chlamydomonas reinhardtii
Cre14.g614900 2.0kb upstream 2.0kb upstream 14968 true chromosome_14: 1085670-1100637 Chlamydomonas reinhardtii
Cre14.g614900 2.0kb upstream 2.0kb upstream 2000 false chromosome_14: 1098638-1100637 Chlamydomonas reinhardtii
Cre14.g614900 2.0kb downstream 2.0kb downstream 14968 true chromosome_14: 1083670-1098637 Chlamydomonas reinhardtii
Cre14.g614900 2.0kb downstream 2.0kb downstream 2000 false chromosome_14: 1083670-1085669 Chlamydomonas reinhardtii
Cre14.g614900 5.0kb upstream 5.0kb upstream 17968 true chromosome_14: 1085670-1103637 Chlamydomonas reinhardtii
Cre14.g614900 5.0kb upstream 5.0kb upstream 5000 false chromosome_14: 1098638-1103637 Chlamydomonas reinhardtii
Cre14.g614900 5.0kb downstream 5.0kb downstream 17968 true chromosome_14: 1080670-1098637 Chlamydomonas reinhardtii
Cre14.g614900 5.0kb downstream 5.0kb downstream 5000 false chromosome_14: 1080670-1085669 Chlamydomonas reinhardtii
Cre14.g614900 10.0kb upstream 10.0kb upstream 22968 true chromosome_14: 1085670-1108637 Chlamydomonas reinhardtii
Cre14.g614900 10.0kb upstream 10.0kb upstream 10000 false chromosome_14: 1098638-1108637 Chlamydomonas reinhardtii
Cre14.g614900 10.0kb downstream 10.0kb downstream 22968 true chromosome_14: 1075670-1098637 Chlamydomonas reinhardtii
Cre14.g614900 10.0kb downstream 10.0kb downstream 10000 false chromosome_14: 1075670-1085669 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109503 5260 Chlorophyte View MSA
123424701 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.873        
cufflinks 2.977       High
cufflinks 2.433        
cufflinks 2.279        
cufflinks 2.702        
cufflinks 2.204        
cufflinks 2.108        
cufflinks 2.266        
cufflinks 2.511        
cufflinks 0.825       Low
cufflinks 2.378        
cufflinks 1.906        
cufflinks 1.004       Low
cufflinks 2.487        
cufflinks 1.762        
cufflinks 2.715        
cufflinks 1.348        
cufflinks 2.478        
cufflinks 0.444       Low
cufflinks 1.223        
cufflinks 1.777        
cufflinks 1.061       Low
cufflinks 1.219        
cufflinks 2.093        
cufflinks 1.25        
cufflinks 24.8981 0.0 54.0155   Low
cufflinks 37.0556 5.23646 68.8748 High  
cufflinks 20.0548 0.0 47.189    
cufflinks 13.9436 0.0 29.7952   Low
cufflinks 31.579 0.0 65.063 High High

0 Strain