Gene : PHC58 C. reinhardtii v5.6
Primary Identifier:  ? Cre14.g612633 Defline:  (1 of 70) PF12499 - Pherophorin (DUF3707)
Genomic Order:  105 Name:  ? Cre14.g612633
Secondary Identifier:  ? PAC:30776147
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre14.g612633 0.5kb upstream 0.5kb upstream 38923 true chromosome_14: 690473-729395 Chlamydomonas reinhardtii
Cre14.g612633 0.5kb upstream 0.5kb upstream 500 false chromosome_14: 728896-729395 Chlamydomonas reinhardtii
Cre14.g612633 0.5kb downstream 0.5kb downstream 38923 true chromosome_14: 689973-728895 Chlamydomonas reinhardtii
Cre14.g612633 0.5kb downstream 0.5kb downstream 500 false chromosome_14: 689973-690472 Chlamydomonas reinhardtii
Cre14.g612633 1.0kb upstream 1.0kb upstream 39423 true chromosome_14: 690473-729895 Chlamydomonas reinhardtii
Cre14.g612633 1.0kb upstream 1.0kb upstream 1000 false chromosome_14: 728896-729895 Chlamydomonas reinhardtii
Cre14.g612633 1.0kb downstream 1.0kb downstream 39423 true chromosome_14: 689473-728895 Chlamydomonas reinhardtii
Cre14.g612633 1.0kb downstream 1.0kb downstream 1000 false chromosome_14: 689473-690472 Chlamydomonas reinhardtii
Cre14.g612633 2.0kb upstream 2.0kb upstream 40423 true chromosome_14: 690473-730895 Chlamydomonas reinhardtii
Cre14.g612633 2.0kb upstream 2.0kb upstream 2000 false chromosome_14: 728896-730895 Chlamydomonas reinhardtii
Cre14.g612633 2.0kb downstream 2.0kb downstream 40423 true chromosome_14: 688473-728895 Chlamydomonas reinhardtii
Cre14.g612633 2.0kb downstream 2.0kb downstream 2000 false chromosome_14: 688473-690472 Chlamydomonas reinhardtii
Cre14.g612633 5.0kb upstream 5.0kb upstream 43423 true chromosome_14: 690473-733895 Chlamydomonas reinhardtii
Cre14.g612633 5.0kb upstream 5.0kb upstream 5000 false chromosome_14: 728896-733895 Chlamydomonas reinhardtii
Cre14.g612633 5.0kb downstream 5.0kb downstream 43423 true chromosome_14: 685473-728895 Chlamydomonas reinhardtii
Cre14.g612633 5.0kb downstream 5.0kb downstream 5000 false chromosome_14: 685473-690472 Chlamydomonas reinhardtii
Cre14.g612633 10.0kb upstream 10.0kb upstream 48423 true chromosome_14: 690473-738895 Chlamydomonas reinhardtii
Cre14.g612633 10.0kb upstream 10.0kb upstream 10000 false chromosome_14: 728896-738895 Chlamydomonas reinhardtii
Cre14.g612633 10.0kb downstream 10.0kb downstream 48423 true chromosome_14: 680473-728895 Chlamydomonas reinhardtii
Cre14.g612633 10.0kb downstream 10.0kb downstream 10000 false chromosome_14: 680473-690472 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076798 5260 Chlorophyte Singleton cluster - no MSA
123394855 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.97       Low
cufflinks 2.299       Low
cufflinks 3.963        
cufflinks 3.728        
cufflinks 3.465        
cufflinks 3.65        
cufflinks 3.614        
cufflinks 4.282        
cufflinks 2.399        
cufflinks 4.106        
cufflinks 4.435        
cufflinks 4.92       High
cufflinks 3.685        
cufflinks 3.293        
cufflinks 3.183        
cufflinks 4.225        
cufflinks 2.511        
cufflinks 4.185        
cufflinks 2.341        
cufflinks 2.993        
cufflinks 3.46        
cufflinks 2.152       Low
cufflinks 3.946        
cufflinks 3.877        
cufflinks 3.409        
cufflinks 20.873 0.0 42.5815    
cufflinks 40.6976 5.87613 75.519 High  
cufflinks 8.20192 0.0 16.8617    
cufflinks 15.7865 0.0 32.3884    
cufflinks 148.63 8.4349 288.825 High  

0 Strain