Gene : Cre14.g632050 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR14240 - RPGR-INTERACTING PROTEIN 1 RELATED Genomic Order:  556
Name:  ? Cre14.g632050 Secondary Identifier:  ? PAC:30776160
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre14.g632050 0.5kb upstream 0.5kb upstream 16491 true chromosome_14: 3719964-3736454 Chlamydomonas reinhardtii
Cre14.g632050 0.5kb upstream 0.5kb upstream 500 false chromosome_14: 3719964-3720463 Chlamydomonas reinhardtii
Cre14.g632050 0.5kb downstream 0.5kb downstream 16491 true chromosome_14: 3720464-3736954 Chlamydomonas reinhardtii
Cre14.g632050 0.5kb downstream 0.5kb downstream 500 false chromosome_14: 3736455-3736954 Chlamydomonas reinhardtii
Cre14.g632050 1.0kb upstream 1.0kb upstream 16991 true chromosome_14: 3719464-3736454 Chlamydomonas reinhardtii
Cre14.g632050 1.0kb upstream 1.0kb upstream 1000 false chromosome_14: 3719464-3720463 Chlamydomonas reinhardtii
Cre14.g632050 1.0kb downstream 1.0kb downstream 16991 true chromosome_14: 3720464-3737454 Chlamydomonas reinhardtii
Cre14.g632050 1.0kb downstream 1.0kb downstream 1000 false chromosome_14: 3736455-3737454 Chlamydomonas reinhardtii
Cre14.g632050 2.0kb upstream 2.0kb upstream 17991 true chromosome_14: 3718464-3736454 Chlamydomonas reinhardtii
Cre14.g632050 2.0kb upstream 2.0kb upstream 2000 false chromosome_14: 3718464-3720463 Chlamydomonas reinhardtii
Cre14.g632050 2.0kb downstream 2.0kb downstream 17991 true chromosome_14: 3720464-3738454 Chlamydomonas reinhardtii
Cre14.g632050 2.0kb downstream 2.0kb downstream 2000 false chromosome_14: 3736455-3738454 Chlamydomonas reinhardtii
Cre14.g632050 5.0kb upstream 5.0kb upstream 20991 true chromosome_14: 3715464-3736454 Chlamydomonas reinhardtii
Cre14.g632050 5.0kb upstream 5.0kb upstream 5000 false chromosome_14: 3715464-3720463 Chlamydomonas reinhardtii
Cre14.g632050 5.0kb downstream 5.0kb downstream 20991 true chromosome_14: 3720464-3741454 Chlamydomonas reinhardtii
Cre14.g632050 5.0kb downstream 5.0kb downstream 5000 false chromosome_14: 3736455-3741454 Chlamydomonas reinhardtii
Cre14.g632050 10.0kb upstream 10.0kb upstream 25991 true chromosome_14: 3710464-3736454 Chlamydomonas reinhardtii
Cre14.g632050 10.0kb upstream 10.0kb upstream 10000 false chromosome_14: 3710464-3720463 Chlamydomonas reinhardtii
Cre14.g632050 10.0kb downstream 10.0kb downstream 25991 true chromosome_14: 3720464-3746454 Chlamydomonas reinhardtii
Cre14.g632050 10.0kb downstream 10.0kb downstream 10000 false chromosome_14: 3736455-3746454 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124093402 5260 Chlorophyte View MSA
123410558 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.026     Low  
cufflinks 0.009     Low Low
cufflinks 0.39        
cufflinks 0.585        
cufflinks 0.439        
cufflinks 0.137     Low  
cufflinks 0.273        
cufflinks 0.493        
cufflinks 0.583        
cufflinks 0.005     Low Low
cufflinks 0.358        
cufflinks 0.485        
cufflinks 0.245        
cufflinks 0.202        
cufflinks 0.443        
cufflinks 0.006     Low Low
cufflinks 0.037     Low  
cufflinks 0.276        
cufflinks 0.006     Low Low
cufflinks 0.131     Low  
cufflinks 0.1     Low  
cufflinks 0.001     Low Low
cufflinks 2.011       High
cufflinks 0.403        
cufflinks 0.007     Low Low
cufflinks 0.921952 0.106795 1.73711   Low
cufflinks 2.37083 0.473483 4.26818    
cufflinks 3.47522 0.0 7.01722    
cufflinks 1.90809 0.324178 3.492    
cufflinks 2.46913 0.471321 4.46695    

0 Strain