Gene : Cre13.g580450 C. reinhardtii v5.6
Defline:  (1 of 55) PF00651 - BTB/POZ domain (BTB) Genomic Order:  428
Name:  ? Cre13.g580450 Secondary Identifier:  ? PAC:30784289
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g580450 0.5kb upstream 0.5kb upstream 7516 true chromosome_13: 2515356-2522871 Chlamydomonas reinhardtii
Cre13.g580450 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 2522372-2522871 Chlamydomonas reinhardtii
Cre13.g580450 0.5kb downstream 0.5kb downstream 7516 true chromosome_13: 2514856-2522371 Chlamydomonas reinhardtii
Cre13.g580450 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 2514856-2515355 Chlamydomonas reinhardtii
Cre13.g580450 1.0kb upstream 1.0kb upstream 8016 true chromosome_13: 2515356-2523371 Chlamydomonas reinhardtii
Cre13.g580450 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 2522372-2523371 Chlamydomonas reinhardtii
Cre13.g580450 1.0kb downstream 1.0kb downstream 8016 true chromosome_13: 2514356-2522371 Chlamydomonas reinhardtii
Cre13.g580450 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 2514356-2515355 Chlamydomonas reinhardtii
Cre13.g580450 2.0kb upstream 2.0kb upstream 9016 true chromosome_13: 2515356-2524371 Chlamydomonas reinhardtii
Cre13.g580450 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 2522372-2524371 Chlamydomonas reinhardtii
Cre13.g580450 2.0kb downstream 2.0kb downstream 9016 true chromosome_13: 2513356-2522371 Chlamydomonas reinhardtii
Cre13.g580450 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 2513356-2515355 Chlamydomonas reinhardtii
Cre13.g580450 5.0kb upstream 5.0kb upstream 12016 true chromosome_13: 2515356-2527371 Chlamydomonas reinhardtii
Cre13.g580450 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 2522372-2527371 Chlamydomonas reinhardtii
Cre13.g580450 5.0kb downstream 5.0kb downstream 12016 true chromosome_13: 2510356-2522371 Chlamydomonas reinhardtii
Cre13.g580450 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 2510356-2515355 Chlamydomonas reinhardtii
Cre13.g580450 10.0kb upstream 10.0kb upstream 17016 true chromosome_13: 2515356-2532371 Chlamydomonas reinhardtii
Cre13.g580450 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 2522372-2532371 Chlamydomonas reinhardtii
Cre13.g580450 10.0kb downstream 10.0kb downstream 17016 true chromosome_13: 2505356-2522371 Chlamydomonas reinhardtii
Cre13.g580450 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 2505356-2515355 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124079262 5260 Chlorophyte Singleton cluster - no MSA
123426971 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.699       Low
cufflinks 8.196       High
cufflinks 6.153        
cufflinks 6.132        
cufflinks 6.728        
cufflinks 6.487        
cufflinks 8.993       High
cufflinks 6.125        
cufflinks 1.97        
cufflinks 1.509       Low
cufflinks 3.722        
cufflinks 6.086        
cufflinks 1.894       Low
cufflinks 6.647        
cufflinks 4.86        
cufflinks 2.789        
cufflinks 2.223        
cufflinks 6.286        
cufflinks 0.767       Low
cufflinks 5.441        
cufflinks 5.468        
cufflinks 1.453       Low
cufflinks 6.879        
cufflinks 3.966        
cufflinks 1.517       Low
cufflinks 5.65621 0.63734 10.6751    
cufflinks 4.58684 1.24126 7.93241   Low
cufflinks 8.24036 0.0 16.6013   High
cufflinks 8.70532 0.612852 16.7978    
cufflinks 11.2048 1.77935 20.6303   High

0 Strain