Gene : FAP228 C. reinhardtii v5.6
Primary Identifier:  ? Cre13.g574900 Defline:  (1 of 4) K00706 - 1,3-beta-glucan synthase (E2.4.1.34)
Genomic Order:  302 Name:  ? Cre13.g574900
Secondary Identifier:  ? PAC:30784210
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6773 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g574900 0.5kb upstream 0.5kb upstream 16058 true chromosome_13: 1777367-1793424 Chlamydomonas reinhardtii
Cre13.g574900 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 1792925-1793424 Chlamydomonas reinhardtii
Cre13.g574900 0.5kb downstream 0.5kb downstream 16058 true chromosome_13: 1776867-1792924 Chlamydomonas reinhardtii
Cre13.g574900 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 1776867-1777366 Chlamydomonas reinhardtii
Cre13.g574900 1.0kb upstream 1.0kb upstream 16558 true chromosome_13: 1777367-1793924 Chlamydomonas reinhardtii
Cre13.g574900 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 1792925-1793924 Chlamydomonas reinhardtii
Cre13.g574900 1.0kb downstream 1.0kb downstream 16558 true chromosome_13: 1776367-1792924 Chlamydomonas reinhardtii
Cre13.g574900 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 1776367-1777366 Chlamydomonas reinhardtii
Cre13.g574900 2.0kb upstream 2.0kb upstream 17558 true chromosome_13: 1777367-1794924 Chlamydomonas reinhardtii
Cre13.g574900 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 1792925-1794924 Chlamydomonas reinhardtii
Cre13.g574900 2.0kb downstream 2.0kb downstream 17558 true chromosome_13: 1775367-1792924 Chlamydomonas reinhardtii
Cre13.g574900 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 1775367-1777366 Chlamydomonas reinhardtii
Cre13.g574900 5.0kb upstream 5.0kb upstream 20558 true chromosome_13: 1777367-1797924 Chlamydomonas reinhardtii
Cre13.g574900 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 1792925-1797924 Chlamydomonas reinhardtii
Cre13.g574900 5.0kb downstream 5.0kb downstream 20558 true chromosome_13: 1772367-1792924 Chlamydomonas reinhardtii
Cre13.g574900 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 1772367-1777366 Chlamydomonas reinhardtii
Cre13.g574900 10.0kb upstream 10.0kb upstream 25558 true chromosome_13: 1777367-1802924 Chlamydomonas reinhardtii
Cre13.g574900 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 1792925-1802924 Chlamydomonas reinhardtii
Cre13.g574900 10.0kb downstream 10.0kb downstream 25558 true chromosome_13: 1767367-1792924 Chlamydomonas reinhardtii
Cre13.g574900 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 1767367-1777366 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076297 5260 Chlorophyte View MSA
123394408 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.646       Low
cufflinks 9.513        
cufflinks 9.06        
cufflinks 12.484        
cufflinks 7.503        
cufflinks 8.374        
cufflinks 8.17        
cufflinks 11.95        
cufflinks 4.613       Low
cufflinks 2.029       Low
cufflinks 14.262     High  
cufflinks 14.38     High  
cufflinks 2.611       Low
cufflinks 10.374        
cufflinks 10.48        
cufflinks 7.464        
cufflinks 13.555     High  
cufflinks 7.964        
cufflinks 2.694       Low
cufflinks 18.86     High High
cufflinks 12.322        
cufflinks 11.264     High  
cufflinks 11.325        
cufflinks 11.148        
cufflinks 12.645     High  
cufflinks 16.0994 0.0 32.9951 High High
cufflinks 21.5705 3.95265 39.1884    
cufflinks 12.5726 0.0 26.0706   Low
cufflinks 21.517 0.0 44.149   High
cufflinks 17.6918 0.753201 34.6304    

0 Strain