Gene : FAP27 C. reinhardtii v5.6
Primary Identifier:  ? Cre14.g611100 Defline:  Flagellar Associated Protein 27
Genomic Order:  74 Name:  ? Cre14.g611100
Secondary Identifier:  ? PAC:30776153
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre14.g611100 0.5kb upstream 0.5kb upstream 7116 true chromosome_14: 471606-478721 Chlamydomonas reinhardtii
Cre14.g611100 0.5kb upstream 0.5kb upstream 500 false chromosome_14: 478222-478721 Chlamydomonas reinhardtii
Cre14.g611100 0.5kb downstream 0.5kb downstream 7116 true chromosome_14: 471106-478221 Chlamydomonas reinhardtii
Cre14.g611100 0.5kb downstream 0.5kb downstream 500 false chromosome_14: 471106-471605 Chlamydomonas reinhardtii
Cre14.g611100 1.0kb upstream 1.0kb upstream 7616 true chromosome_14: 471606-479221 Chlamydomonas reinhardtii
Cre14.g611100 1.0kb upstream 1.0kb upstream 1000 false chromosome_14: 478222-479221 Chlamydomonas reinhardtii
Cre14.g611100 1.0kb downstream 1.0kb downstream 7616 true chromosome_14: 470606-478221 Chlamydomonas reinhardtii
Cre14.g611100 1.0kb downstream 1.0kb downstream 1000 false chromosome_14: 470606-471605 Chlamydomonas reinhardtii
Cre14.g611100 2.0kb upstream 2.0kb upstream 8616 true chromosome_14: 471606-480221 Chlamydomonas reinhardtii
Cre14.g611100 2.0kb upstream 2.0kb upstream 2000 false chromosome_14: 478222-480221 Chlamydomonas reinhardtii
Cre14.g611100 2.0kb downstream 2.0kb downstream 8616 true chromosome_14: 469606-478221 Chlamydomonas reinhardtii
Cre14.g611100 2.0kb downstream 2.0kb downstream 2000 false chromosome_14: 469606-471605 Chlamydomonas reinhardtii
Cre14.g611100 5.0kb upstream 5.0kb upstream 11616 true chromosome_14: 471606-483221 Chlamydomonas reinhardtii
Cre14.g611100 5.0kb upstream 5.0kb upstream 5000 false chromosome_14: 478222-483221 Chlamydomonas reinhardtii
Cre14.g611100 5.0kb downstream 5.0kb downstream 11616 true chromosome_14: 466606-478221 Chlamydomonas reinhardtii
Cre14.g611100 5.0kb downstream 5.0kb downstream 5000 false chromosome_14: 466606-471605 Chlamydomonas reinhardtii
Cre14.g611100 10.0kb upstream 10.0kb upstream 16616 true chromosome_14: 471606-488221 Chlamydomonas reinhardtii
Cre14.g611100 10.0kb upstream 10.0kb upstream 10000 false chromosome_14: 478222-488221 Chlamydomonas reinhardtii
Cre14.g611100 10.0kb downstream 10.0kb downstream 16616 true chromosome_14: 461606-478221 Chlamydomonas reinhardtii
Cre14.g611100 10.0kb downstream 10.0kb downstream 10000 false chromosome_14: 461606-471605 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109042 5260 Chlorophyte View MSA
123428988 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.223       Low
cufflinks 1.306        
cufflinks 1.326        
cufflinks 2.123       High
cufflinks 0.976        
cufflinks 0.918        
cufflinks 1.113        
cufflinks 1.397        
cufflinks 0.227       Low
cufflinks 0.415       Low
cufflinks 2.385       High
cufflinks 1.222        
cufflinks 0.397       Low
cufflinks 1.114        
cufflinks 1.396        
cufflinks 0.469        
cufflinks 0.685        
cufflinks 1.108        
cufflinks 0.338       Low
cufflinks 1.409        
cufflinks 1.406        
cufflinks 0.358       Low
cufflinks 0.819        
cufflinks 1.244        
cufflinks 0.421        
cufflinks 4.34191 0.345782 8.33804   High
cufflinks 9.96652 1.67636 18.2567    
cufflinks 9.98089 0.0 21.3191    
cufflinks 6.0938 0.673184 11.5144    
cufflinks 8.12746 1.0735 15.1814    

0 Strain