Gene : Cre12.g554750 C. reinhardtii v5.6
Defline:  (1 of 1) KOG4495 - RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin B Genomic Order:  1401
Name:  ? Cre12.g554750 Secondary Identifier:  ? PAC:30792834
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g554750 0.5kb upstream 0.5kb upstream 2292 true chromosome_12: 7640941-7643232 Chlamydomonas reinhardtii
Cre12.g554750 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 7640941-7641440 Chlamydomonas reinhardtii
Cre12.g554750 0.5kb downstream 0.5kb downstream 2292 true chromosome_12: 7641441-7643732 Chlamydomonas reinhardtii
Cre12.g554750 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 7643233-7643732 Chlamydomonas reinhardtii
Cre12.g554750 1.0kb upstream 1.0kb upstream 2792 true chromosome_12: 7640441-7643232 Chlamydomonas reinhardtii
Cre12.g554750 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 7640441-7641440 Chlamydomonas reinhardtii
Cre12.g554750 1.0kb downstream 1.0kb downstream 2792 true chromosome_12: 7641441-7644232 Chlamydomonas reinhardtii
Cre12.g554750 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 7643233-7644232 Chlamydomonas reinhardtii
Cre12.g554750 2.0kb upstream 2.0kb upstream 3792 true chromosome_12: 7639441-7643232 Chlamydomonas reinhardtii
Cre12.g554750 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 7639441-7641440 Chlamydomonas reinhardtii
Cre12.g554750 2.0kb downstream 2.0kb downstream 3792 true chromosome_12: 7641441-7645232 Chlamydomonas reinhardtii
Cre12.g554750 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 7643233-7645232 Chlamydomonas reinhardtii
Cre12.g554750 5.0kb upstream 5.0kb upstream 6792 true chromosome_12: 7636441-7643232 Chlamydomonas reinhardtii
Cre12.g554750 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 7636441-7641440 Chlamydomonas reinhardtii
Cre12.g554750 5.0kb downstream 5.0kb downstream 6792 true chromosome_12: 7641441-7648232 Chlamydomonas reinhardtii
Cre12.g554750 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 7643233-7648232 Chlamydomonas reinhardtii
Cre12.g554750 10.0kb upstream 10.0kb upstream 11792 true chromosome_12: 7631441-7643232 Chlamydomonas reinhardtii
Cre12.g554750 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 7631441-7641440 Chlamydomonas reinhardtii
Cre12.g554750 10.0kb downstream 10.0kb downstream 11792 true chromosome_12: 7641441-7653232 Chlamydomonas reinhardtii
Cre12.g554750 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 7643233-7653232 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110703 5260 Chlorophyte View MSA
123425021 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 76.249     High  
cufflinks 56.232     High  
cufflinks 72.071     High  
cufflinks 77.915     High  
cufflinks 56.94     High  
cufflinks 63.403     High  
cufflinks 67.909     High  
cufflinks 65.153     High  
cufflinks 53.51     High  
cufflinks 53.967     High  
cufflinks 107.524     High High
cufflinks 32.512     High Low
cufflinks 48.532     High  
cufflinks 90.787     High High
cufflinks 74.361     High  
cufflinks 47.979     High  
cufflinks 55.995     High  
cufflinks 26.758     High Low
cufflinks 55.113     High  
cufflinks 44.191     High  
cufflinks 41.065     High  
cufflinks 31.736     High Low
cufflinks 76.591     High  
cufflinks 37.956     High  
cufflinks 25.886     High Low
cufflinks 70.1464 1.58088 138.712 High High
cufflinks 42.1868 11.4208 72.9529 High  
cufflinks 51.1186 0.0 103.386 High  
cufflinks 32.6135 3.16901 62.058 High Low
cufflinks 66.8145 9.88707 123.742 High High

0 Strain