Gene : PSBP1 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g550850 Defline:  (1 of 1) PTHR31407:SF6 - OXYGEN-EVOLVING ENHANCER PROTEIN 2-1, CHLOROPLASTIC-RELATED
Genomic Order:  1488 Name:  ? Cre12.g550850
Secondary Identifier:  ? PAC:30791734
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g550850 0.5kb upstream 0.5kb upstream 2994 true chromosome_12: 8182596-8185589 Chlamydomonas reinhardtii
Cre12.g550850 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 8182596-8183095 Chlamydomonas reinhardtii
Cre12.g550850 0.5kb downstream 0.5kb downstream 2994 true chromosome_12: 8183096-8186089 Chlamydomonas reinhardtii
Cre12.g550850 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 8185590-8186089 Chlamydomonas reinhardtii
Cre12.g550850 1.0kb upstream 1.0kb upstream 3494 true chromosome_12: 8182096-8185589 Chlamydomonas reinhardtii
Cre12.g550850 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 8182096-8183095 Chlamydomonas reinhardtii
Cre12.g550850 1.0kb downstream 1.0kb downstream 3494 true chromosome_12: 8183096-8186589 Chlamydomonas reinhardtii
Cre12.g550850 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 8185590-8186589 Chlamydomonas reinhardtii
Cre12.g550850 2.0kb upstream 2.0kb upstream 4494 true chromosome_12: 8181096-8185589 Chlamydomonas reinhardtii
Cre12.g550850 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 8181096-8183095 Chlamydomonas reinhardtii
Cre12.g550850 2.0kb downstream 2.0kb downstream 4494 true chromosome_12: 8183096-8187589 Chlamydomonas reinhardtii
Cre12.g550850 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 8185590-8187589 Chlamydomonas reinhardtii
Cre12.g550850 5.0kb upstream 5.0kb upstream 7494 true chromosome_12: 8178096-8185589 Chlamydomonas reinhardtii
Cre12.g550850 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 8178096-8183095 Chlamydomonas reinhardtii
Cre12.g550850 5.0kb downstream 5.0kb downstream 7494 true chromosome_12: 8183096-8190589 Chlamydomonas reinhardtii
Cre12.g550850 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 8185590-8190589 Chlamydomonas reinhardtii
Cre12.g550850 10.0kb upstream 10.0kb upstream 12494 true chromosome_12: 8173096-8185589 Chlamydomonas reinhardtii
Cre12.g550850 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 8173096-8183095 Chlamydomonas reinhardtii
Cre12.g550850 10.0kb downstream 10.0kb downstream 12494 true chromosome_12: 8183096-8195589 Chlamydomonas reinhardtii
Cre12.g550850 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 8185590-8195589 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110441 5260 Chlorophyte View MSA
123424877 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2609.75     High High
cufflinks 1823.88     High  
cufflinks 1356.82     High  
cufflinks 1200.19     High  
cufflinks 1862.09     High  
cufflinks 2134.21     High  
cufflinks 772.73     High Low
cufflinks 1507.91     High  
cufflinks 2525.38     High High
cufflinks 1947.52     High  
cufflinks 879.67     High Low
cufflinks 1753.1     High  
cufflinks 2256.52     High  
cufflinks 2006.67     High  
cufflinks 1557.2     High  
cufflinks 2534.47     High High
cufflinks 2351.13     High  
cufflinks 1510.15     High  
cufflinks 613.715     High Low
cufflinks 616.818     High Low
cufflinks 1691.68     High  
cufflinks 2356.37     High  
cufflinks 900.718     High Low
cufflinks 1234.44     High  
cufflinks 2343.19     High  
cufflinks 916.554 116.433 1716.68 High  
cufflinks 1316.49 81.1607 2551.81 High  
cufflinks 919.772 0.0 1963.17 High  
cufflinks 859.345 100.247 1618.44 High  
cufflinks 1538.29 74.3738 3002.2 High  

0 Strain