Gene : PHC4 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g549000 Defline:  (1 of 70) PF12499 - Pherophorin (DUF3707)
Genomic Order:  1528 Name:  ? Cre12.g549000
Secondary Identifier:  ? PAC:30793308
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g549000 0.5kb upstream 0.5kb upstream 3356 true chromosome_12: 8384544-8387899 Chlamydomonas reinhardtii
Cre12.g549000 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 8384544-8385043 Chlamydomonas reinhardtii
Cre12.g549000 0.5kb downstream 0.5kb downstream 3356 true chromosome_12: 8385044-8388399 Chlamydomonas reinhardtii
Cre12.g549000 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 8387900-8388399 Chlamydomonas reinhardtii
Cre12.g549000 1.0kb upstream 1.0kb upstream 3856 true chromosome_12: 8384044-8387899 Chlamydomonas reinhardtii
Cre12.g549000 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 8384044-8385043 Chlamydomonas reinhardtii
Cre12.g549000 1.0kb downstream 1.0kb downstream 3856 true chromosome_12: 8385044-8388899 Chlamydomonas reinhardtii
Cre12.g549000 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 8387900-8388899 Chlamydomonas reinhardtii
Cre12.g549000 2.0kb upstream 2.0kb upstream 4856 true chromosome_12: 8383044-8387899 Chlamydomonas reinhardtii
Cre12.g549000 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 8383044-8385043 Chlamydomonas reinhardtii
Cre12.g549000 2.0kb downstream 2.0kb downstream 4856 true chromosome_12: 8385044-8389899 Chlamydomonas reinhardtii
Cre12.g549000 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 8387900-8389899 Chlamydomonas reinhardtii
Cre12.g549000 5.0kb upstream 5.0kb upstream 7856 true chromosome_12: 8380044-8387899 Chlamydomonas reinhardtii
Cre12.g549000 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 8380044-8385043 Chlamydomonas reinhardtii
Cre12.g549000 5.0kb downstream 5.0kb downstream 7856 true chromosome_12: 8385044-8392899 Chlamydomonas reinhardtii
Cre12.g549000 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 8387900-8392899 Chlamydomonas reinhardtii
Cre12.g549000 10.0kb upstream 10.0kb upstream 12856 true chromosome_12: 8375044-8387899 Chlamydomonas reinhardtii
Cre12.g549000 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 8375044-8385043 Chlamydomonas reinhardtii
Cre12.g549000 10.0kb downstream 10.0kb downstream 12856 true chromosome_12: 8385044-8397899 Chlamydomonas reinhardtii
Cre12.g549000 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 8387900-8397899 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081414 5260 Chlorophyte View MSA
123399144 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.967        
cufflinks 13.316        
cufflinks 14.007        
cufflinks 32.819     High  
cufflinks 10.189        
cufflinks 6.889        
cufflinks 43.128     High High
cufflinks 19.243     High  
cufflinks 0.207       Low
cufflinks 1.726        
cufflinks 36.578     High  
cufflinks 42.14     High High
cufflinks 7.029        
cufflinks 11.019        
cufflinks 55.714     High High
cufflinks 0.568       Low
cufflinks 0.216       Low
cufflinks 7.017        
cufflinks 0.144       Low
cufflinks 4.614        
cufflinks 39.223     High High
cufflinks 0.24       Low
cufflinks 61.742     High High
cufflinks 6.046        
cufflinks 0.152       Low
cufflinks 6.86527 1.13656 12.594    
cufflinks 13.4129 3.58223 23.2436    
cufflinks 44.088 0.0 90.2701 High  
cufflinks 5.382 0.912032 9.85196    
cufflinks 30.0445 4.40737 55.6817 High  

0 Strain