Gene : FAP220 C. reinhardtii v5.6
Primary Identifier:  ? Cre13.g567363 Defline:  Flagellar Associated Protein 220
Genomic Order:  134 Name:  ? Cre13.g567363
Secondary Identifier:  ? PAC:30784529
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g567363 0.5kb upstream 0.5kb upstream 6042 true chromosome_13: 846758-852799 Chlamydomonas reinhardtii
Cre13.g567363 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 846758-847257 Chlamydomonas reinhardtii
Cre13.g567363 0.5kb downstream 0.5kb downstream 6042 true chromosome_13: 847258-853299 Chlamydomonas reinhardtii
Cre13.g567363 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 852800-853299 Chlamydomonas reinhardtii
Cre13.g567363 1.0kb upstream 1.0kb upstream 6542 true chromosome_13: 846258-852799 Chlamydomonas reinhardtii
Cre13.g567363 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 846258-847257 Chlamydomonas reinhardtii
Cre13.g567363 1.0kb downstream 1.0kb downstream 6542 true chromosome_13: 847258-853799 Chlamydomonas reinhardtii
Cre13.g567363 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 852800-853799 Chlamydomonas reinhardtii
Cre13.g567363 2.0kb upstream 2.0kb upstream 7542 true chromosome_13: 845258-852799 Chlamydomonas reinhardtii
Cre13.g567363 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 845258-847257 Chlamydomonas reinhardtii
Cre13.g567363 2.0kb downstream 2.0kb downstream 7542 true chromosome_13: 847258-854799 Chlamydomonas reinhardtii
Cre13.g567363 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 852800-854799 Chlamydomonas reinhardtii
Cre13.g567363 5.0kb upstream 5.0kb upstream 10542 true chromosome_13: 842258-852799 Chlamydomonas reinhardtii
Cre13.g567363 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 842258-847257 Chlamydomonas reinhardtii
Cre13.g567363 5.0kb downstream 5.0kb downstream 10542 true chromosome_13: 847258-857799 Chlamydomonas reinhardtii
Cre13.g567363 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 852800-857799 Chlamydomonas reinhardtii
Cre13.g567363 10.0kb upstream 10.0kb upstream 15542 true chromosome_13: 837258-852799 Chlamydomonas reinhardtii
Cre13.g567363 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 837258-847257 Chlamydomonas reinhardtii
Cre13.g567363 10.0kb downstream 10.0kb downstream 15542 true chromosome_13: 847258-862799 Chlamydomonas reinhardtii
Cre13.g567363 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 852800-862799 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124093944 5260 Chlorophyte View MSA
123427397 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.369       Low
cufflinks 1.463        
cufflinks 3.105        
cufflinks 5.911       High
cufflinks 1.057        
cufflinks 0.979        
cufflinks 1.194        
cufflinks 2.257        
cufflinks 0.45       Low
cufflinks 0.554        
cufflinks 10.936       High
cufflinks 1.92        
cufflinks 0.661        
cufflinks 1.192        
cufflinks 3.658       High
cufflinks 0.26       Low
cufflinks 0.545        
cufflinks 1.775        
cufflinks 0.603        
cufflinks 1.917        
cufflinks 3.62       High
cufflinks 0.47       Low
cufflinks 1.148        
cufflinks 3.281       High
cufflinks 0.439       Low
cufflinks 0.948873 0.00347839 1.89427    
cufflinks 4.66569 1.1143 8.21709    
cufflinks 5.12651 0.0 10.4448    
cufflinks 2.84324 0.417638 5.26885    
cufflinks 4.73636 0.918524 8.55419   Low

0 Strain