Gene : PDE16 C. reinhardtii v5.6
Primary Identifier:  ? Cre13.g567400 Defline:  (1 of 18) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase
Genomic Order:  135 Name:  ? Cre13.g567400
Secondary Identifier:  ? PAC:30784580
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g567400 0.5kb upstream 0.5kb upstream 12073 true chromosome_13: 852995-865067 Chlamydomonas reinhardtii
Cre13.g567400 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 864568-865067 Chlamydomonas reinhardtii
Cre13.g567400 0.5kb downstream 0.5kb downstream 12073 true chromosome_13: 852495-864567 Chlamydomonas reinhardtii
Cre13.g567400 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 852495-852994 Chlamydomonas reinhardtii
Cre13.g567400 1.0kb upstream 1.0kb upstream 12573 true chromosome_13: 852995-865567 Chlamydomonas reinhardtii
Cre13.g567400 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 864568-865567 Chlamydomonas reinhardtii
Cre13.g567400 1.0kb downstream 1.0kb downstream 12573 true chromosome_13: 851995-864567 Chlamydomonas reinhardtii
Cre13.g567400 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 851995-852994 Chlamydomonas reinhardtii
Cre13.g567400 2.0kb upstream 2.0kb upstream 13573 true chromosome_13: 852995-866567 Chlamydomonas reinhardtii
Cre13.g567400 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 864568-866567 Chlamydomonas reinhardtii
Cre13.g567400 2.0kb downstream 2.0kb downstream 13573 true chromosome_13: 850995-864567 Chlamydomonas reinhardtii
Cre13.g567400 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 850995-852994 Chlamydomonas reinhardtii
Cre13.g567400 5.0kb upstream 5.0kb upstream 16573 true chromosome_13: 852995-869567 Chlamydomonas reinhardtii
Cre13.g567400 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 864568-869567 Chlamydomonas reinhardtii
Cre13.g567400 5.0kb downstream 5.0kb downstream 16573 true chromosome_13: 847995-864567 Chlamydomonas reinhardtii
Cre13.g567400 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 847995-852994 Chlamydomonas reinhardtii
Cre13.g567400 10.0kb upstream 10.0kb upstream 21573 true chromosome_13: 852995-874567 Chlamydomonas reinhardtii
Cre13.g567400 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 864568-874567 Chlamydomonas reinhardtii
Cre13.g567400 10.0kb downstream 10.0kb downstream 21573 true chromosome_13: 842995-864567 Chlamydomonas reinhardtii
Cre13.g567400 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 842995-852994 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124085109 5260 Chlorophyte View MSA
123402602 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.922        
cufflinks 0.114     Low Low
cufflinks 4.154       High
cufflinks 8.604       High
cufflinks 0.146     Low  
cufflinks 0.419        
cufflinks 0.169     Low  
cufflinks 2.078        
cufflinks 0.764        
cufflinks 0.057     Low Low
cufflinks 15.694     High High
cufflinks 1.264        
cufflinks 0.301        
cufflinks 0.257        
cufflinks 2.678        
cufflinks 0.445        
cufflinks 0.898        
cufflinks 2.875        
cufflinks 0.013     Low Low
cufflinks 0.259        
cufflinks 2.741        
cufflinks 0.814        
cufflinks 0.096     Low Low
cufflinks 3.477        
cufflinks 0.952        
cufflinks 0.0673067 0.0 0.153927 Low Low
cufflinks 0.0752975 0.0 0.21039 Low  
cufflinks 1.52889 0.0 3.20034   High
cufflinks 0.0177062 0.0 0.0479256 Low  
cufflinks 3.6135 0.726109 6.50089    

0 Strain