Gene : FAP369 C. reinhardtii v5.6
Primary Identifier:  ? Cre13.g563700 Defline:  (1 of 49) PTHR22847 - WD40 REPEAT PROTEIN
Genomic Order:  44 Name:  ? Cre13.g563700
Secondary Identifier:  ? PAC:30783888
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g563700 0.5kb upstream 0.5kb upstream 19427 true chromosome_13: 230389-249815 Chlamydomonas reinhardtii
Cre13.g563700 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 230389-230888 Chlamydomonas reinhardtii
Cre13.g563700 0.5kb downstream 0.5kb downstream 19427 true chromosome_13: 230889-250315 Chlamydomonas reinhardtii
Cre13.g563700 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 249816-250315 Chlamydomonas reinhardtii
Cre13.g563700 1.0kb upstream 1.0kb upstream 19927 true chromosome_13: 229889-249815 Chlamydomonas reinhardtii
Cre13.g563700 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 229889-230888 Chlamydomonas reinhardtii
Cre13.g563700 1.0kb downstream 1.0kb downstream 19927 true chromosome_13: 230889-250815 Chlamydomonas reinhardtii
Cre13.g563700 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 249816-250815 Chlamydomonas reinhardtii
Cre13.g563700 2.0kb upstream 2.0kb upstream 20927 true chromosome_13: 228889-249815 Chlamydomonas reinhardtii
Cre13.g563700 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 228889-230888 Chlamydomonas reinhardtii
Cre13.g563700 2.0kb downstream 2.0kb downstream 20927 true chromosome_13: 230889-251815 Chlamydomonas reinhardtii
Cre13.g563700 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 249816-251815 Chlamydomonas reinhardtii
Cre13.g563700 5.0kb upstream 5.0kb upstream 23927 true chromosome_13: 225889-249815 Chlamydomonas reinhardtii
Cre13.g563700 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 225889-230888 Chlamydomonas reinhardtii
Cre13.g563700 5.0kb downstream 5.0kb downstream 23927 true chromosome_13: 230889-254815 Chlamydomonas reinhardtii
Cre13.g563700 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 249816-254815 Chlamydomonas reinhardtii
Cre13.g563700 10.0kb upstream 10.0kb upstream 28927 true chromosome_13: 220889-249815 Chlamydomonas reinhardtii
Cre13.g563700 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 220889-230888 Chlamydomonas reinhardtii
Cre13.g563700 10.0kb downstream 10.0kb downstream 28927 true chromosome_13: 230889-259815 Chlamydomonas reinhardtii
Cre13.g563700 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 249816-259815 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086856 5260 Chlorophyte View MSA
123404148 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.152       Low
cufflinks 0.442        
cufflinks 0.356        
cufflinks 0.771       High
cufflinks 0.371        
cufflinks 0.311        
cufflinks 0.39        
cufflinks 0.556        
cufflinks 0.178       Low
cufflinks 0.137       Low
cufflinks 0.615       High
cufflinks 0.534        
cufflinks 0.154       Low
cufflinks 0.321        
cufflinks 0.514        
cufflinks 0.273        
cufflinks 0.42        
cufflinks 0.471        
cufflinks 0.125       Low
cufflinks 0.461        
cufflinks 0.525        
cufflinks 0.376        
cufflinks 0.294        
cufflinks 0.507        
cufflinks 0.466        
cufflinks 0.843248 0.073524 1.61297   High
cufflinks 4.56087 1.23107 7.89067    
cufflinks 1.68931 0.0 3.59983    
cufflinks 2.09565 0.354956 3.83634   High
cufflinks 2.28846 0.43311 4.1438    

0 Strain