Gene : FAP161 C. reinhardtii v5.6
Primary Identifier:  ? Cre13.g564400 Defline:  Flagellar Associated Protein 161
Genomic Order:  59 Name:  ? Cre13.g564400
Secondary Identifier:  ? PAC:30783986
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre13.g564400 0.5kb upstream 0.5kb upstream 5130 true chromosome_13: 351380-356509 Chlamydomonas reinhardtii
Cre13.g564400 0.5kb upstream 0.5kb upstream 500 false chromosome_13: 356010-356509 Chlamydomonas reinhardtii
Cre13.g564400 0.5kb downstream 0.5kb downstream 5130 true chromosome_13: 350880-356009 Chlamydomonas reinhardtii
Cre13.g564400 0.5kb downstream 0.5kb downstream 500 false chromosome_13: 350880-351379 Chlamydomonas reinhardtii
Cre13.g564400 1.0kb upstream 1.0kb upstream 5630 true chromosome_13: 351380-357009 Chlamydomonas reinhardtii
Cre13.g564400 1.0kb upstream 1.0kb upstream 1000 false chromosome_13: 356010-357009 Chlamydomonas reinhardtii
Cre13.g564400 1.0kb downstream 1.0kb downstream 5630 true chromosome_13: 350380-356009 Chlamydomonas reinhardtii
Cre13.g564400 1.0kb downstream 1.0kb downstream 1000 false chromosome_13: 350380-351379 Chlamydomonas reinhardtii
Cre13.g564400 2.0kb upstream 2.0kb upstream 6630 true chromosome_13: 351380-358009 Chlamydomonas reinhardtii
Cre13.g564400 2.0kb upstream 2.0kb upstream 2000 false chromosome_13: 356010-358009 Chlamydomonas reinhardtii
Cre13.g564400 2.0kb downstream 2.0kb downstream 6630 true chromosome_13: 349380-356009 Chlamydomonas reinhardtii
Cre13.g564400 2.0kb downstream 2.0kb downstream 2000 false chromosome_13: 349380-351379 Chlamydomonas reinhardtii
Cre13.g564400 5.0kb upstream 5.0kb upstream 9630 true chromosome_13: 351380-361009 Chlamydomonas reinhardtii
Cre13.g564400 5.0kb upstream 5.0kb upstream 5000 false chromosome_13: 356010-361009 Chlamydomonas reinhardtii
Cre13.g564400 5.0kb downstream 5.0kb downstream 9630 true chromosome_13: 346380-356009 Chlamydomonas reinhardtii
Cre13.g564400 5.0kb downstream 5.0kb downstream 5000 false chromosome_13: 346380-351379 Chlamydomonas reinhardtii
Cre13.g564400 10.0kb upstream 10.0kb upstream 14630 true chromosome_13: 351380-366009 Chlamydomonas reinhardtii
Cre13.g564400 10.0kb upstream 10.0kb upstream 10000 false chromosome_13: 356010-366009 Chlamydomonas reinhardtii
Cre13.g564400 10.0kb downstream 10.0kb downstream 14630 true chromosome_13: 341380-356009 Chlamydomonas reinhardtii
Cre13.g564400 10.0kb downstream 10.0kb downstream 10000 false chromosome_13: 341380-351379 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109109 5260 Chlorophyte View MSA
123422895 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.392       Low
cufflinks 8.483        
cufflinks 11.109       High
cufflinks 11.357       High
cufflinks 6.096        
cufflinks 6.846        
cufflinks 5.293        
cufflinks 6.812        
cufflinks 3.794        
cufflinks 5.392        
cufflinks 16.207     High High
cufflinks 5.391        
cufflinks 6.041        
cufflinks 7.206        
cufflinks 7.937        
cufflinks 3.594        
cufflinks 3.311       Low
cufflinks 8.452        
cufflinks 3.357       Low
cufflinks 6.486        
cufflinks 6.559        
cufflinks 2.264       Low
cufflinks 4.361        
cufflinks 6.825        
cufflinks 2.814       Low
cufflinks 8.47725 1.10388 15.8506    
cufflinks 9.48088 2.57587 16.3859    
cufflinks 12.7183 0.0 25.5848    
cufflinks 7.86604 1.06251 14.6696    
cufflinks 13.4185 2.46225 24.3748    

0 Strain