Gene : FAP303 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g528000 Defline:  (1 of 3) PTHR13780//PTHR13780:SF49 - AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT // SUBFAMILY NOT NAMED
Genomic Order:  986 Name:  ? Cre12.g528000
Secondary Identifier:  ? PAC:30793504
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g528000 0.5kb upstream 0.5kb upstream 4249 true chromosome_12: 5215068-5219316 Chlamydomonas reinhardtii
Cre12.g528000 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 5218817-5219316 Chlamydomonas reinhardtii
Cre12.g528000 0.5kb downstream 0.5kb downstream 4249 true chromosome_12: 5214568-5218816 Chlamydomonas reinhardtii
Cre12.g528000 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 5214568-5215067 Chlamydomonas reinhardtii
Cre12.g528000 1.0kb upstream 1.0kb upstream 4749 true chromosome_12: 5215068-5219816 Chlamydomonas reinhardtii
Cre12.g528000 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 5218817-5219816 Chlamydomonas reinhardtii
Cre12.g528000 1.0kb downstream 1.0kb downstream 4749 true chromosome_12: 5214068-5218816 Chlamydomonas reinhardtii
Cre12.g528000 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 5214068-5215067 Chlamydomonas reinhardtii
Cre12.g528000 2.0kb upstream 2.0kb upstream 5749 true chromosome_12: 5215068-5220816 Chlamydomonas reinhardtii
Cre12.g528000 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 5218817-5220816 Chlamydomonas reinhardtii
Cre12.g528000 2.0kb downstream 2.0kb downstream 5749 true chromosome_12: 5213068-5218816 Chlamydomonas reinhardtii
Cre12.g528000 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 5213068-5215067 Chlamydomonas reinhardtii
Cre12.g528000 5.0kb upstream 5.0kb upstream 8749 true chromosome_12: 5215068-5223816 Chlamydomonas reinhardtii
Cre12.g528000 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 5218817-5223816 Chlamydomonas reinhardtii
Cre12.g528000 5.0kb downstream 5.0kb downstream 8749 true chromosome_12: 5210068-5218816 Chlamydomonas reinhardtii
Cre12.g528000 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 5210068-5215067 Chlamydomonas reinhardtii
Cre12.g528000 10.0kb upstream 10.0kb upstream 13749 true chromosome_12: 5215068-5228816 Chlamydomonas reinhardtii
Cre12.g528000 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 5218817-5228816 Chlamydomonas reinhardtii
Cre12.g528000 10.0kb downstream 10.0kb downstream 13749 true chromosome_12: 5205068-5218816 Chlamydomonas reinhardtii
Cre12.g528000 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 5205068-5215067 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111311 5260 Chlorophyte View MSA
123427907 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 220.137     High  
cufflinks 208.057     High  
cufflinks 246.177     High  
cufflinks 229.642     High  
cufflinks 234.194     High  
cufflinks 243.03     High  
cufflinks 307.845     High High
cufflinks 173.737     High  
cufflinks 171.501     High  
cufflinks 212.645     High  
cufflinks 205.888     High  
cufflinks 211.407     High  
cufflinks 131.464     High Low
cufflinks 227.261     High  
cufflinks 203.414     High  
cufflinks 183.983     High  
cufflinks 187.397     High  
cufflinks 210.473     High  
cufflinks 286.675     High High
cufflinks 403.0     High High
cufflinks 274.494     High  
cufflinks 140.897     High Low
cufflinks 323.392     High High
cufflinks 183.641     High  
cufflinks 127.155     High Low
cufflinks 441.585 20.7827 862.387 High High
cufflinks 431.481 48.7363 814.225 High  
cufflinks 127.795 0.0 267.871 High  
cufflinks 479.485 27.6309 931.34 High  
cufflinks 394.919 4.53274 785.305 High  

0 Strain