Gene : HEL56 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g526850 Defline:  (1 of 1) K14810 - ATP-dependent RNA helicase DDX56/DBP9 [EC:3.6.4.13] (DDX56, DBP9)
Genomic Order:  963 Name:  ? Cre12.g526850
Secondary Identifier:  ? PAC:30793359
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g526850 0.5kb upstream 0.5kb upstream 5309 true chromosome_12: 5102686-5107994 Chlamydomonas reinhardtii
Cre12.g526850 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 5102686-5103185 Chlamydomonas reinhardtii
Cre12.g526850 0.5kb downstream 0.5kb downstream 5309 true chromosome_12: 5103186-5108494 Chlamydomonas reinhardtii
Cre12.g526850 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 5107995-5108494 Chlamydomonas reinhardtii
Cre12.g526850 1.0kb upstream 1.0kb upstream 5809 true chromosome_12: 5102186-5107994 Chlamydomonas reinhardtii
Cre12.g526850 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 5102186-5103185 Chlamydomonas reinhardtii
Cre12.g526850 1.0kb downstream 1.0kb downstream 5809 true chromosome_12: 5103186-5108994 Chlamydomonas reinhardtii
Cre12.g526850 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 5107995-5108994 Chlamydomonas reinhardtii
Cre12.g526850 2.0kb upstream 2.0kb upstream 6809 true chromosome_12: 5101186-5107994 Chlamydomonas reinhardtii
Cre12.g526850 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 5101186-5103185 Chlamydomonas reinhardtii
Cre12.g526850 2.0kb downstream 2.0kb downstream 6809 true chromosome_12: 5103186-5109994 Chlamydomonas reinhardtii
Cre12.g526850 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 5107995-5109994 Chlamydomonas reinhardtii
Cre12.g526850 5.0kb upstream 5.0kb upstream 9809 true chromosome_12: 5098186-5107994 Chlamydomonas reinhardtii
Cre12.g526850 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 5098186-5103185 Chlamydomonas reinhardtii
Cre12.g526850 5.0kb downstream 5.0kb downstream 9809 true chromosome_12: 5103186-5112994 Chlamydomonas reinhardtii
Cre12.g526850 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 5107995-5112994 Chlamydomonas reinhardtii
Cre12.g526850 10.0kb upstream 10.0kb upstream 14809 true chromosome_12: 5093186-5107994 Chlamydomonas reinhardtii
Cre12.g526850 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 5093186-5103185 Chlamydomonas reinhardtii
Cre12.g526850 10.0kb downstream 10.0kb downstream 14809 true chromosome_12: 5103186-5117994 Chlamydomonas reinhardtii
Cre12.g526850 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 5107995-5117994 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108336 5260 Chlorophyte View MSA
123424907 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.906        
cufflinks 4.299       High
cufflinks 1.569        
cufflinks 2.733        
cufflinks 3.195        
cufflinks 2.675        
cufflinks 4.197       High
cufflinks 2.842        
cufflinks 1.549        
cufflinks 0.528       Low
cufflinks 2.384        
cufflinks 3.018        
cufflinks 0.626       Low
cufflinks 2.704        
cufflinks 2.264        
cufflinks 2.898        
cufflinks 0.369       Low
cufflinks 1.837        
cufflinks 0.895        
cufflinks 3.101        
cufflinks 2.96        
cufflinks 0.517       Low
cufflinks 3.102        
cufflinks 2.503        
cufflinks 0.477       Low
cufflinks 25.8587 0.5962 51.1212   High
cufflinks 26.6147 6.89243 46.3369    
cufflinks 2.05629 0.0 4.6317    
cufflinks 8.55692 1.16233 15.9515   Low
cufflinks 16.7291 2.97566 30.4826   High

0 Strain