Gene : FAP54 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g518550 Defline:  (1 of 1) PF14858 - Domain of unknown function (DUF4486) (DUF4486)
Genomic Order:  770 Name:  ? Cre12.g518550
Secondary Identifier:  ? PAC:30792166
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g518550 0.5kb upstream 0.5kb upstream 14333 true chromosome_12: 4186218-4200550 Chlamydomonas reinhardtii
Cre12.g518550 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 4200051-4200550 Chlamydomonas reinhardtii
Cre12.g518550 0.5kb downstream 0.5kb downstream 14333 true chromosome_12: 4185718-4200050 Chlamydomonas reinhardtii
Cre12.g518550 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 4185718-4186217 Chlamydomonas reinhardtii
Cre12.g518550 1.0kb upstream 1.0kb upstream 14833 true chromosome_12: 4186218-4201050 Chlamydomonas reinhardtii
Cre12.g518550 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 4200051-4201050 Chlamydomonas reinhardtii
Cre12.g518550 1.0kb downstream 1.0kb downstream 14833 true chromosome_12: 4185218-4200050 Chlamydomonas reinhardtii
Cre12.g518550 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 4185218-4186217 Chlamydomonas reinhardtii
Cre12.g518550 2.0kb upstream 2.0kb upstream 15833 true chromosome_12: 4186218-4202050 Chlamydomonas reinhardtii
Cre12.g518550 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 4200051-4202050 Chlamydomonas reinhardtii
Cre12.g518550 2.0kb downstream 2.0kb downstream 15833 true chromosome_12: 4184218-4200050 Chlamydomonas reinhardtii
Cre12.g518550 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 4184218-4186217 Chlamydomonas reinhardtii
Cre12.g518550 5.0kb upstream 5.0kb upstream 18833 true chromosome_12: 4186218-4205050 Chlamydomonas reinhardtii
Cre12.g518550 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 4200051-4205050 Chlamydomonas reinhardtii
Cre12.g518550 5.0kb downstream 5.0kb downstream 18833 true chromosome_12: 4181218-4200050 Chlamydomonas reinhardtii
Cre12.g518550 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 4181218-4186217 Chlamydomonas reinhardtii
Cre12.g518550 10.0kb upstream 10.0kb upstream 23833 true chromosome_12: 4186218-4210050 Chlamydomonas reinhardtii
Cre12.g518550 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 4200051-4210050 Chlamydomonas reinhardtii
Cre12.g518550 10.0kb downstream 10.0kb downstream 23833 true chromosome_12: 4176218-4200050 Chlamydomonas reinhardtii
Cre12.g518550 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 4176218-4186217 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110779 5260 Chlorophyte View MSA
123423136 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.077     Low Low
cufflinks 0.549        
cufflinks 0.89       High
cufflinks 1.059       High
cufflinks 0.337        
cufflinks 0.345        
cufflinks 0.456        
cufflinks 0.618        
cufflinks 0.131       Low
cufflinks 0.171        
cufflinks 1.635       High
cufflinks 0.623        
cufflinks 0.222        
cufflinks 0.388        
cufflinks 0.769        
cufflinks 0.167        
cufflinks 0.171        
cufflinks 0.514        
cufflinks 0.136       Low
cufflinks 0.582        
cufflinks 0.75        
cufflinks 0.09     Low Low
cufflinks 0.475        
cufflinks 0.507        
cufflinks 0.123       Low
cufflinks 0.609532 0.0513183 1.16775   Low
cufflinks 2.89317 0.706565 5.07978    
cufflinks 3.29677 0.0 6.65592    
cufflinks 2.46388 0.378565 4.54919   High
cufflinks 4.26261 0.837006 7.68821    

0 Strain