Gene : FAP42 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g519950 Defline:  (1 of 1) PTHR23359//PTHR23359:SF92 - NUCLEOTIDE KINASE // SUBFAMILY NOT NAMED
Genomic Order:  796 Name:  ? Cre12.g519950
Secondary Identifier:  ? PAC:30792650
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6126 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7219 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7229 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-841 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g519950 0.5kb upstream 0.5kb upstream 11072 true chromosome_12: 4307731-4318802 Chlamydomonas reinhardtii
Cre12.g519950 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 4307731-4308230 Chlamydomonas reinhardtii
Cre12.g519950 0.5kb downstream 0.5kb downstream 11072 true chromosome_12: 4308231-4319302 Chlamydomonas reinhardtii
Cre12.g519950 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 4318803-4319302 Chlamydomonas reinhardtii
Cre12.g519950 1.0kb upstream 1.0kb upstream 11572 true chromosome_12: 4307231-4318802 Chlamydomonas reinhardtii
Cre12.g519950 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 4307231-4308230 Chlamydomonas reinhardtii
Cre12.g519950 1.0kb downstream 1.0kb downstream 11572 true chromosome_12: 4308231-4319802 Chlamydomonas reinhardtii
Cre12.g519950 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 4318803-4319802 Chlamydomonas reinhardtii
Cre12.g519950 2.0kb upstream 2.0kb upstream 12572 true chromosome_12: 4306231-4318802 Chlamydomonas reinhardtii
Cre12.g519950 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 4306231-4308230 Chlamydomonas reinhardtii
Cre12.g519950 2.0kb downstream 2.0kb downstream 12572 true chromosome_12: 4308231-4320802 Chlamydomonas reinhardtii
Cre12.g519950 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 4318803-4320802 Chlamydomonas reinhardtii
Cre12.g519950 5.0kb upstream 5.0kb upstream 15572 true chromosome_12: 4303231-4318802 Chlamydomonas reinhardtii
Cre12.g519950 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 4303231-4308230 Chlamydomonas reinhardtii
Cre12.g519950 5.0kb downstream 5.0kb downstream 15572 true chromosome_12: 4308231-4323802 Chlamydomonas reinhardtii
Cre12.g519950 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 4318803-4323802 Chlamydomonas reinhardtii
Cre12.g519950 10.0kb upstream 10.0kb upstream 20572 true chromosome_12: 4298231-4318802 Chlamydomonas reinhardtii
Cre12.g519950 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 4298231-4308230 Chlamydomonas reinhardtii
Cre12.g519950 10.0kb downstream 10.0kb downstream 20572 true chromosome_12: 4308231-4328802 Chlamydomonas reinhardtii
Cre12.g519950 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 4318803-4328802 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109495 5260 Chlorophyte View MSA
123422948 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.22       Low
cufflinks 1.454        
cufflinks 1.746        
cufflinks 2.768       High
cufflinks 0.737        
cufflinks 0.674        
cufflinks 1.049        
cufflinks 1.731        
cufflinks 0.328       Low
cufflinks 0.292       Low
cufflinks 4.244       High
cufflinks 1.516        
cufflinks 0.342        
cufflinks 0.917        
cufflinks 1.499        
cufflinks 0.219       Low
cufflinks 0.513        
cufflinks 1.15        
cufflinks 0.219       Low
cufflinks 1.473        
cufflinks 1.789        
cufflinks 0.237       Low
cufflinks 1.129        
cufflinks 1.413        
cufflinks 0.314       Low
cufflinks 1.7951 0.303994 3.28621    
cufflinks 4.73808 1.28278 8.19338    
cufflinks 5.54466 0.0 11.1455    
cufflinks 4.3343 0.448265 8.22033    
cufflinks 4.10391 0.806429 7.40139    

0 Strain