Gene : PHC53 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g546800 Defline:  (1 of 70) PF12499 - Pherophorin (DUF3707)
Genomic Order:  1578 Name:  ? Cre12.g546800
Secondary Identifier:  ? PAC:30791772
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g546800 0.5kb upstream 0.5kb upstream 6234 true chromosome_12: 8642192-8648425 Chlamydomonas reinhardtii
Cre12.g546800 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 8647926-8648425 Chlamydomonas reinhardtii
Cre12.g546800 0.5kb downstream 0.5kb downstream 6234 true chromosome_12: 8641692-8647925 Chlamydomonas reinhardtii
Cre12.g546800 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 8641692-8642191 Chlamydomonas reinhardtii
Cre12.g546800 1.0kb upstream 1.0kb upstream 6734 true chromosome_12: 8642192-8648925 Chlamydomonas reinhardtii
Cre12.g546800 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 8647926-8648925 Chlamydomonas reinhardtii
Cre12.g546800 1.0kb downstream 1.0kb downstream 6734 true chromosome_12: 8641192-8647925 Chlamydomonas reinhardtii
Cre12.g546800 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 8641192-8642191 Chlamydomonas reinhardtii
Cre12.g546800 2.0kb upstream 2.0kb upstream 7734 true chromosome_12: 8642192-8649925 Chlamydomonas reinhardtii
Cre12.g546800 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 8647926-8649925 Chlamydomonas reinhardtii
Cre12.g546800 2.0kb downstream 2.0kb downstream 7734 true chromosome_12: 8640192-8647925 Chlamydomonas reinhardtii
Cre12.g546800 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 8640192-8642191 Chlamydomonas reinhardtii
Cre12.g546800 5.0kb upstream 5.0kb upstream 10734 true chromosome_12: 8642192-8652925 Chlamydomonas reinhardtii
Cre12.g546800 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 8647926-8652925 Chlamydomonas reinhardtii
Cre12.g546800 5.0kb downstream 5.0kb downstream 10734 true chromosome_12: 8637192-8647925 Chlamydomonas reinhardtii
Cre12.g546800 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 8637192-8642191 Chlamydomonas reinhardtii
Cre12.g546800 10.0kb upstream 10.0kb upstream 15734 true chromosome_12: 8642192-8657925 Chlamydomonas reinhardtii
Cre12.g546800 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 8647926-8657925 Chlamydomonas reinhardtii
Cre12.g546800 10.0kb downstream 10.0kb downstream 15734 true chromosome_12: 8632192-8647925 Chlamydomonas reinhardtii
Cre12.g546800 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 8632192-8642191 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081813 5260 Chlorophyte View MSA
123399520 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.433        
cufflinks 0.352        
cufflinks 0.305        
cufflinks 1.728        
cufflinks 0.635        
cufflinks 0.459        
cufflinks 0.759        
cufflinks 2.668       High
cufflinks 0.553        
cufflinks 0.041     Low Low
cufflinks 1.544        
cufflinks 2.99       High
cufflinks 0.163        
cufflinks 0.179        
cufflinks 4.477       High
cufflinks 0.059     Low Low
cufflinks 0.288        
cufflinks 0.556        
cufflinks 0.075     Low Low
cufflinks 0.034     Low Low
cufflinks 3.509       High
cufflinks 3.184       High
cufflinks 0.07     Low Low
cufflinks 2.248        
cufflinks 2.81       High
cufflinks 0.121202 0.0 0.287551 Low High
cufflinks 7.53345 1.76015 13.3067    
cufflinks 0.04806 0.0 0.213005 Low Low
cufflinks 0.134366 0.0 0.314839 Low  
cufflinks 1.73873 0.0700843 3.40738    

0 Strain