Gene : CYN20-6 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g544114 Defline:  (1 of 5) K03768 - peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] (PPIB, ppiB)
Genomic Order:  1645 Name:  ? Cre12.g544114
Secondary Identifier:  ? PAC:30792216
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g544114 0.5kb upstream 0.5kb upstream 3246 true chromosome_12: 8959997-8963242 Chlamydomonas reinhardtii
Cre12.g544114 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 8962743-8963242 Chlamydomonas reinhardtii
Cre12.g544114 0.5kb downstream 0.5kb downstream 3246 true chromosome_12: 8959497-8962742 Chlamydomonas reinhardtii
Cre12.g544114 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 8959497-8959996 Chlamydomonas reinhardtii
Cre12.g544114 1.0kb upstream 1.0kb upstream 3746 true chromosome_12: 8959997-8963742 Chlamydomonas reinhardtii
Cre12.g544114 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 8962743-8963742 Chlamydomonas reinhardtii
Cre12.g544114 1.0kb downstream 1.0kb downstream 3746 true chromosome_12: 8958997-8962742 Chlamydomonas reinhardtii
Cre12.g544114 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 8958997-8959996 Chlamydomonas reinhardtii
Cre12.g544114 2.0kb upstream 2.0kb upstream 4746 true chromosome_12: 8959997-8964742 Chlamydomonas reinhardtii
Cre12.g544114 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 8962743-8964742 Chlamydomonas reinhardtii
Cre12.g544114 2.0kb downstream 2.0kb downstream 4746 true chromosome_12: 8957997-8962742 Chlamydomonas reinhardtii
Cre12.g544114 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 8957997-8959996 Chlamydomonas reinhardtii
Cre12.g544114 5.0kb upstream 5.0kb upstream 7746 true chromosome_12: 8959997-8967742 Chlamydomonas reinhardtii
Cre12.g544114 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 8962743-8967742 Chlamydomonas reinhardtii
Cre12.g544114 5.0kb downstream 5.0kb downstream 7746 true chromosome_12: 8954997-8962742 Chlamydomonas reinhardtii
Cre12.g544114 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 8954997-8959996 Chlamydomonas reinhardtii
Cre12.g544114 10.0kb upstream 10.0kb upstream 12746 true chromosome_12: 8959997-8972742 Chlamydomonas reinhardtii
Cre12.g544114 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 8962743-8972742 Chlamydomonas reinhardtii
Cre12.g544114 10.0kb downstream 10.0kb downstream 12746 true chromosome_12: 8949997-8962742 Chlamydomonas reinhardtii
Cre12.g544114 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 8949997-8959996 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112771 5260 Chlorophyte View MSA
123428973 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.365       High
cufflinks 3.341        
cufflinks 2.569        
cufflinks 2.229        
cufflinks 3.17        
cufflinks 3.674        
cufflinks 2.675        
cufflinks 2.058        
cufflinks 3.642        
cufflinks 1.473        
cufflinks 1.437        
cufflinks 2.318        
cufflinks 1.777        
cufflinks 3.142        
cufflinks 1.587        
cufflinks 5.732       High
cufflinks 2.894        
cufflinks 2.807        
cufflinks 0.44       Low
cufflinks 0.836       Low
cufflinks 1.854        
cufflinks 2.938        
cufflinks 1.471        
cufflinks 1.903        
cufflinks 3.553        
cufflinks 33.6322 2.39555 64.8689 High  
cufflinks 1.84708 0.0 4.15223    
cufflinks 0.611027 0.0 1.79003    
cufflinks 29.9963 2.40201 57.5906 High  
cufflinks 48.5146 7.14359 89.8856 High High

0 Strain