Gene : CYN20-2 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g544150 Defline:  (1 of 5) K03768 - peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] (PPIB, ppiB)
Genomic Order:  1638 Name:  ? Cre12.g544150
Secondary Identifier:  ? PAC:30791953
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g544150 0.5kb upstream 0.5kb upstream 3422 true chromosome_12: 8924647-8928068 Chlamydomonas reinhardtii
Cre12.g544150 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 8927569-8928068 Chlamydomonas reinhardtii
Cre12.g544150 0.5kb downstream 0.5kb downstream 3422 true chromosome_12: 8924147-8927568 Chlamydomonas reinhardtii
Cre12.g544150 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 8924147-8924646 Chlamydomonas reinhardtii
Cre12.g544150 1.0kb upstream 1.0kb upstream 3922 true chromosome_12: 8924647-8928568 Chlamydomonas reinhardtii
Cre12.g544150 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 8927569-8928568 Chlamydomonas reinhardtii
Cre12.g544150 1.0kb downstream 1.0kb downstream 3922 true chromosome_12: 8923647-8927568 Chlamydomonas reinhardtii
Cre12.g544150 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 8923647-8924646 Chlamydomonas reinhardtii
Cre12.g544150 2.0kb upstream 2.0kb upstream 4922 true chromosome_12: 8924647-8929568 Chlamydomonas reinhardtii
Cre12.g544150 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 8927569-8929568 Chlamydomonas reinhardtii
Cre12.g544150 2.0kb downstream 2.0kb downstream 4922 true chromosome_12: 8922647-8927568 Chlamydomonas reinhardtii
Cre12.g544150 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 8922647-8924646 Chlamydomonas reinhardtii
Cre12.g544150 5.0kb upstream 5.0kb upstream 7922 true chromosome_12: 8924647-8932568 Chlamydomonas reinhardtii
Cre12.g544150 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 8927569-8932568 Chlamydomonas reinhardtii
Cre12.g544150 5.0kb downstream 5.0kb downstream 7922 true chromosome_12: 8919647-8927568 Chlamydomonas reinhardtii
Cre12.g544150 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 8919647-8924646 Chlamydomonas reinhardtii
Cre12.g544150 10.0kb upstream 10.0kb upstream 12922 true chromosome_12: 8924647-8937568 Chlamydomonas reinhardtii
Cre12.g544150 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 8927569-8937568 Chlamydomonas reinhardtii
Cre12.g544150 10.0kb downstream 10.0kb downstream 12922 true chromosome_12: 8914647-8927568 Chlamydomonas reinhardtii
Cre12.g544150 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 8914647-8924646 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112771 5260 Chlorophyte View MSA
123428973 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.998     High High
cufflinks 26.64     High  
cufflinks 19.884     High  
cufflinks 14.48        
cufflinks 28.535     High  
cufflinks 26.631     High  
cufflinks 17.67     High  
cufflinks 14.855        
cufflinks 37.227     High High
cufflinks 20.529     High  
cufflinks 9.297       Low
cufflinks 16.874     High  
cufflinks 25.615     High  
cufflinks 24.087     High  
cufflinks 13.617     High  
cufflinks 40.079     High High
cufflinks 24.557     High  
cufflinks 22.9     High  
cufflinks 3.559       Low
cufflinks 6.342       Low
cufflinks 15.698     High  
cufflinks 25.01     High  
cufflinks 11.921        
cufflinks 13.338        
cufflinks 24.86     High  
cufflinks 0.766349 0.0 1.61543   Low
cufflinks 36.2718 9.422 63.1217 High  
cufflinks 21.3736 0.0 42.9922    
cufflinks 0.585063 0.0 1.25293   Low
cufflinks 1.44402 0.0 3.06025   High

0 Strain