Gene : FAP78 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g536600 Defline:  (1 of 7) PTHR11584//PTHR11584:SF381 - SERINE/THREONINE PROTEIN KINASE // PROTEIN PQN-80, ISOFORM B
Genomic Order:  1176 Name:  ? Cre12.g536600
Secondary Identifier:  ? PAC:30792885
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g536600 0.5kb upstream 0.5kb upstream 12826 true chromosome_12: 6197783-6210608 Chlamydomonas reinhardtii
Cre12.g536600 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 6210109-6210608 Chlamydomonas reinhardtii
Cre12.g536600 0.5kb downstream 0.5kb downstream 12826 true chromosome_12: 6197283-6210108 Chlamydomonas reinhardtii
Cre12.g536600 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 6197283-6197782 Chlamydomonas reinhardtii
Cre12.g536600 1.0kb upstream 1.0kb upstream 13326 true chromosome_12: 6197783-6211108 Chlamydomonas reinhardtii
Cre12.g536600 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 6210109-6211108 Chlamydomonas reinhardtii
Cre12.g536600 1.0kb downstream 1.0kb downstream 13326 true chromosome_12: 6196783-6210108 Chlamydomonas reinhardtii
Cre12.g536600 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 6196783-6197782 Chlamydomonas reinhardtii
Cre12.g536600 2.0kb upstream 2.0kb upstream 14326 true chromosome_12: 6197783-6212108 Chlamydomonas reinhardtii
Cre12.g536600 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 6210109-6212108 Chlamydomonas reinhardtii
Cre12.g536600 2.0kb downstream 2.0kb downstream 14326 true chromosome_12: 6195783-6210108 Chlamydomonas reinhardtii
Cre12.g536600 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 6195783-6197782 Chlamydomonas reinhardtii
Cre12.g536600 5.0kb upstream 5.0kb upstream 17326 true chromosome_12: 6197783-6215108 Chlamydomonas reinhardtii
Cre12.g536600 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 6210109-6215108 Chlamydomonas reinhardtii
Cre12.g536600 5.0kb downstream 5.0kb downstream 17326 true chromosome_12: 6192783-6210108 Chlamydomonas reinhardtii
Cre12.g536600 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 6192783-6197782 Chlamydomonas reinhardtii
Cre12.g536600 10.0kb upstream 10.0kb upstream 22326 true chromosome_12: 6197783-6220108 Chlamydomonas reinhardtii
Cre12.g536600 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 6210109-6220108 Chlamydomonas reinhardtii
Cre12.g536600 10.0kb downstream 10.0kb downstream 22326 true chromosome_12: 6187783-6210108 Chlamydomonas reinhardtii
Cre12.g536600 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 6187783-6197782 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109271 5260 Chlorophyte View MSA
123422918 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.61        
cufflinks 0.715       Low
cufflinks 5.075       High
cufflinks 7.122       High
cufflinks 2.05        
cufflinks 1.963        
cufflinks 2.525        
cufflinks 3.781        
cufflinks 0.662       Low
cufflinks 0.873       Low
cufflinks 11.138       High
cufflinks 4.006        
cufflinks 1.247        
cufflinks 2.544        
cufflinks 4.406        
cufflinks 1.169        
cufflinks 2.16        
cufflinks 3.343        
cufflinks 0.883       Low
cufflinks 4.199        
cufflinks 4.589        
cufflinks 1.359        
cufflinks 2.796        
cufflinks 4.158        
cufflinks 1.51        
cufflinks 4.4119 0.378776 8.44502   Low
cufflinks 8.19501 2.1477 14.2423    
cufflinks 8.34636 0.0 16.9297    
cufflinks 6.07195 0.332201 11.8117   High
cufflinks 9.53938 1.2715 17.8073    

0 Strain