Gene : Cre12.g533650 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR13439//PTHR13439:SF0 - CT120 PROTEIN // BCDNA.GH12326 Genomic Order:  1108
Name:  ? Cre12.g533650 Secondary Identifier:  ? PAC:30791973
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g533650 0.5kb upstream 0.5kb upstream 3486 true chromosome_12: 5839739-5843224 Chlamydomonas reinhardtii
Cre12.g533650 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 5842725-5843224 Chlamydomonas reinhardtii
Cre12.g533650 0.5kb downstream 0.5kb downstream 3486 true chromosome_12: 5839239-5842724 Chlamydomonas reinhardtii
Cre12.g533650 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 5839239-5839738 Chlamydomonas reinhardtii
Cre12.g533650 1.0kb upstream 1.0kb upstream 3986 true chromosome_12: 5839739-5843724 Chlamydomonas reinhardtii
Cre12.g533650 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 5842725-5843724 Chlamydomonas reinhardtii
Cre12.g533650 1.0kb downstream 1.0kb downstream 3986 true chromosome_12: 5838739-5842724 Chlamydomonas reinhardtii
Cre12.g533650 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 5838739-5839738 Chlamydomonas reinhardtii
Cre12.g533650 2.0kb upstream 2.0kb upstream 4986 true chromosome_12: 5839739-5844724 Chlamydomonas reinhardtii
Cre12.g533650 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 5842725-5844724 Chlamydomonas reinhardtii
Cre12.g533650 2.0kb downstream 2.0kb downstream 4986 true chromosome_12: 5837739-5842724 Chlamydomonas reinhardtii
Cre12.g533650 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 5837739-5839738 Chlamydomonas reinhardtii
Cre12.g533650 5.0kb upstream 5.0kb upstream 7986 true chromosome_12: 5839739-5847724 Chlamydomonas reinhardtii
Cre12.g533650 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 5842725-5847724 Chlamydomonas reinhardtii
Cre12.g533650 5.0kb downstream 5.0kb downstream 7986 true chromosome_12: 5834739-5842724 Chlamydomonas reinhardtii
Cre12.g533650 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 5834739-5839738 Chlamydomonas reinhardtii
Cre12.g533650 10.0kb upstream 10.0kb upstream 12986 true chromosome_12: 5839739-5852724 Chlamydomonas reinhardtii
Cre12.g533650 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 5842725-5852724 Chlamydomonas reinhardtii
Cre12.g533650 10.0kb downstream 10.0kb downstream 12986 true chromosome_12: 5829739-5842724 Chlamydomonas reinhardtii
Cre12.g533650 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 5829739-5839738 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113090 5260 Chlorophyte View MSA
123428797 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.613        
cufflinks 12.856        
cufflinks 17.833     High  
cufflinks 19.339     High High
cufflinks 9.644        
cufflinks 12.307        
cufflinks 16.377     High  
cufflinks 15.532        
cufflinks 5.468        
cufflinks 4.141       Low
cufflinks 23.556     High High
cufflinks 14.471     High  
cufflinks 6.88        
cufflinks 10.886        
cufflinks 14.431     High  
cufflinks 8.163        
cufflinks 3.114       Low
cufflinks 10.043        
cufflinks 5.031        
cufflinks 11.355        
cufflinks 11.171        
cufflinks 3.035       Low
cufflinks 24.726     High High
cufflinks 12.714        
cufflinks 2.303       Low
cufflinks 17.7858 1.65701 33.9146   High
cufflinks 5.12565 1.07814 9.17316    
cufflinks 5.81066 0.0 11.9029    
cufflinks 9.89049 1.41069 18.3703    
cufflinks 13.1392 2.59266 23.6858    

0 Strain