Gene : POC12 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g495350 Defline:  (1 of 1) K19332 - Meckel syndrome type 1 protein (MKS1)
Genomic Order:  126 Name:  ? Cre12.g495350
Secondary Identifier:  ? PAC:30792464
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g495350 0.5kb upstream 0.5kb upstream 10832 true chromosome_12: 743062-753893 Chlamydomonas reinhardtii
Cre12.g495350 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 743062-743561 Chlamydomonas reinhardtii
Cre12.g495350 0.5kb downstream 0.5kb downstream 10832 true chromosome_12: 743562-754393 Chlamydomonas reinhardtii
Cre12.g495350 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 753894-754393 Chlamydomonas reinhardtii
Cre12.g495350 1.0kb upstream 1.0kb upstream 11332 true chromosome_12: 742562-753893 Chlamydomonas reinhardtii
Cre12.g495350 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 742562-743561 Chlamydomonas reinhardtii
Cre12.g495350 1.0kb downstream 1.0kb downstream 11332 true chromosome_12: 743562-754893 Chlamydomonas reinhardtii
Cre12.g495350 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 753894-754893 Chlamydomonas reinhardtii
Cre12.g495350 2.0kb upstream 2.0kb upstream 12332 true chromosome_12: 741562-753893 Chlamydomonas reinhardtii
Cre12.g495350 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 741562-743561 Chlamydomonas reinhardtii
Cre12.g495350 2.0kb downstream 2.0kb downstream 12332 true chromosome_12: 743562-755893 Chlamydomonas reinhardtii
Cre12.g495350 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 753894-755893 Chlamydomonas reinhardtii
Cre12.g495350 5.0kb upstream 5.0kb upstream 15332 true chromosome_12: 738562-753893 Chlamydomonas reinhardtii
Cre12.g495350 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 738562-743561 Chlamydomonas reinhardtii
Cre12.g495350 5.0kb downstream 5.0kb downstream 15332 true chromosome_12: 743562-758893 Chlamydomonas reinhardtii
Cre12.g495350 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 753894-758893 Chlamydomonas reinhardtii
Cre12.g495350 10.0kb upstream 10.0kb upstream 20332 true chromosome_12: 733562-753893 Chlamydomonas reinhardtii
Cre12.g495350 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 733562-743561 Chlamydomonas reinhardtii
Cre12.g495350 10.0kb downstream 10.0kb downstream 20332 true chromosome_12: 743562-763893 Chlamydomonas reinhardtii
Cre12.g495350 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 753894-763893 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112875 5260 Chlorophyte View MSA
123423547 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.079     Low Low
cufflinks 1.113        
cufflinks 1.263        
cufflinks 1.238        
cufflinks 0.55        
cufflinks 0.702        
cufflinks 1.871       High
cufflinks 1.628        
cufflinks 0.089       Low
cufflinks 0.338        
cufflinks 1.143        
cufflinks 1.331        
cufflinks 0.768        
cufflinks 0.61        
cufflinks 1.0        
cufflinks 0.07     Low Low
cufflinks 0.15       Low
cufflinks 0.79        
cufflinks 0.341        
cufflinks 1.084        
cufflinks 0.656        
cufflinks 0.07     Low Low
cufflinks 2.525       High
cufflinks 1.492        
cufflinks 0.241        
cufflinks 1.37989 0.171005 2.58878   Low
cufflinks 4.06342 0.992361 7.13448    
cufflinks 5.41092 0.0 10.8938    
cufflinks 3.01522 0.506751 5.52368    
cufflinks 3.35677 0.648828 6.0647    

0 Strain