Gene : Cre12.g493300 C. reinhardtii v5.6
Defline:  (1 of 5) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN Genomic Order:  82
Name:  ? Cre12.g493300 Secondary Identifier:  ? PAC:30793488
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g493300 0.5kb upstream 0.5kb upstream 15056 true chromosome_12: 484602-499657 Chlamydomonas reinhardtii
Cre12.g493300 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 499158-499657 Chlamydomonas reinhardtii
Cre12.g493300 0.5kb downstream 0.5kb downstream 15056 true chromosome_12: 484102-499157 Chlamydomonas reinhardtii
Cre12.g493300 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 484102-484601 Chlamydomonas reinhardtii
Cre12.g493300 1.0kb upstream 1.0kb upstream 15556 true chromosome_12: 484602-500157 Chlamydomonas reinhardtii
Cre12.g493300 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 499158-500157 Chlamydomonas reinhardtii
Cre12.g493300 1.0kb downstream 1.0kb downstream 15556 true chromosome_12: 483602-499157 Chlamydomonas reinhardtii
Cre12.g493300 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 483602-484601 Chlamydomonas reinhardtii
Cre12.g493300 2.0kb upstream 2.0kb upstream 16556 true chromosome_12: 484602-501157 Chlamydomonas reinhardtii
Cre12.g493300 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 499158-501157 Chlamydomonas reinhardtii
Cre12.g493300 2.0kb downstream 2.0kb downstream 16556 true chromosome_12: 482602-499157 Chlamydomonas reinhardtii
Cre12.g493300 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 482602-484601 Chlamydomonas reinhardtii
Cre12.g493300 5.0kb upstream 5.0kb upstream 19556 true chromosome_12: 484602-504157 Chlamydomonas reinhardtii
Cre12.g493300 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 499158-504157 Chlamydomonas reinhardtii
Cre12.g493300 5.0kb downstream 5.0kb downstream 19556 true chromosome_12: 479602-499157 Chlamydomonas reinhardtii
Cre12.g493300 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 479602-484601 Chlamydomonas reinhardtii
Cre12.g493300 10.0kb upstream 10.0kb upstream 24556 true chromosome_12: 484602-509157 Chlamydomonas reinhardtii
Cre12.g493300 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 499158-509157 Chlamydomonas reinhardtii
Cre12.g493300 10.0kb downstream 10.0kb downstream 24556 true chromosome_12: 474602-499157 Chlamydomonas reinhardtii
Cre12.g493300 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 474602-484601 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081349 5260 Chlorophyte Singleton cluster - no MSA
123399082 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.313        
cufflinks 0.456        
cufflinks 0.5        
cufflinks 1.422       High
cufflinks 0.329        
cufflinks 0.423        
cufflinks 0.747        
cufflinks 1.125       High
cufflinks 0.399        
cufflinks 0.133       Low
cufflinks 1.252       High
cufflinks 0.75        
cufflinks 0.224       Low
cufflinks 0.315        
cufflinks 0.791        
cufflinks 0.399        
cufflinks 0.781        
cufflinks 0.538        
cufflinks 0.176       Low
cufflinks 1.078       High
cufflinks 0.76        
cufflinks 0.699        
cufflinks 0.545        
cufflinks 1.062       High
cufflinks 0.977        
cufflinks 2.38348 0.386968 4.38   High
cufflinks 3.06374 0.787483 5.33999    
cufflinks 3.01021 0.0 6.09072    
cufflinks 2.66971 0.414966 4.92446   High
cufflinks 1.30393 0.182401 2.42546   Low

0 Strain