Gene : VSP3 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g488450 Defline:  (1 of 5) PTHR16631:SF9 - GLUCAN 1,3-BETA-GLUCOSIDASE
Genomic Order:  213 Name:  ? Cre12.g488450
Secondary Identifier:  ? PAC:30791986
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g488450 0.5kb upstream 0.5kb upstream 3024 true chromosome_12: 1359264-1362287 Chlamydomonas reinhardtii
Cre12.g488450 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 1361788-1362287 Chlamydomonas reinhardtii
Cre12.g488450 0.5kb downstream 0.5kb downstream 3024 true chromosome_12: 1358764-1361787 Chlamydomonas reinhardtii
Cre12.g488450 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 1358764-1359263 Chlamydomonas reinhardtii
Cre12.g488450 1.0kb upstream 1.0kb upstream 3524 true chromosome_12: 1359264-1362787 Chlamydomonas reinhardtii
Cre12.g488450 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 1361788-1362787 Chlamydomonas reinhardtii
Cre12.g488450 1.0kb downstream 1.0kb downstream 3524 true chromosome_12: 1358264-1361787 Chlamydomonas reinhardtii
Cre12.g488450 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 1358264-1359263 Chlamydomonas reinhardtii
Cre12.g488450 2.0kb upstream 2.0kb upstream 4524 true chromosome_12: 1359264-1363787 Chlamydomonas reinhardtii
Cre12.g488450 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 1361788-1363787 Chlamydomonas reinhardtii
Cre12.g488450 2.0kb downstream 2.0kb downstream 4524 true chromosome_12: 1357264-1361787 Chlamydomonas reinhardtii
Cre12.g488450 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 1357264-1359263 Chlamydomonas reinhardtii
Cre12.g488450 5.0kb upstream 5.0kb upstream 7524 true chromosome_12: 1359264-1366787 Chlamydomonas reinhardtii
Cre12.g488450 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 1361788-1366787 Chlamydomonas reinhardtii
Cre12.g488450 5.0kb downstream 5.0kb downstream 7524 true chromosome_12: 1354264-1361787 Chlamydomonas reinhardtii
Cre12.g488450 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 1354264-1359263 Chlamydomonas reinhardtii
Cre12.g488450 10.0kb upstream 10.0kb upstream 12524 true chromosome_12: 1359264-1371787 Chlamydomonas reinhardtii
Cre12.g488450 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 1361788-1371787 Chlamydomonas reinhardtii
Cre12.g488450 10.0kb downstream 10.0kb downstream 12524 true chromosome_12: 1349264-1361787 Chlamydomonas reinhardtii
Cre12.g488450 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 1349264-1359263 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081671 5260 Chlorophyte View MSA
123399387 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.379        
cufflinks 2.884       High
cufflinks 0.078     Low Low
cufflinks 1.697        
cufflinks 11.14       High
cufflinks 0.09     Low Low
cufflinks 0.343        
cufflinks 0.039     Low Low
cufflinks 2.774       High
cufflinks 0.647        
cufflinks 0.3        
cufflinks 7.811       High
cufflinks 0.499        
cufflinks 0.491        
cufflinks 0.549        
cufflinks 0.227        
cufflinks 0.662        
cufflinks 0.73        
cufflinks 1.866        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.533        
cufflinks 0.387        
cufflinks 0.271        
cufflinks 0.788        
cufflinks 0.295        
cufflinks 3.05046 0.22276 5.87817    
cufflinks 3.49602 0.0 7.33692   Low
cufflinks 7.48236 0.0 15.6854    
cufflinks 1.1293 0.0 2.33829   Low
cufflinks 5.11339 0.62372 9.60307   Low

0 Strain