Gene : FAP117 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g517050 Defline:  (1 of 6) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt)
Genomic Order:  736 Name:  ? Cre12.g517050
Secondary Identifier:  ? PAC:30792627
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g517050 0.5kb upstream 0.5kb upstream 3070 true chromosome_12: 4019682-4022751 Chlamydomonas reinhardtii
Cre12.g517050 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 4022252-4022751 Chlamydomonas reinhardtii
Cre12.g517050 0.5kb downstream 0.5kb downstream 3070 true chromosome_12: 4019182-4022251 Chlamydomonas reinhardtii
Cre12.g517050 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 4019182-4019681 Chlamydomonas reinhardtii
Cre12.g517050 1.0kb upstream 1.0kb upstream 3570 true chromosome_12: 4019682-4023251 Chlamydomonas reinhardtii
Cre12.g517050 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 4022252-4023251 Chlamydomonas reinhardtii
Cre12.g517050 1.0kb downstream 1.0kb downstream 3570 true chromosome_12: 4018682-4022251 Chlamydomonas reinhardtii
Cre12.g517050 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 4018682-4019681 Chlamydomonas reinhardtii
Cre12.g517050 2.0kb upstream 2.0kb upstream 4570 true chromosome_12: 4019682-4024251 Chlamydomonas reinhardtii
Cre12.g517050 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 4022252-4024251 Chlamydomonas reinhardtii
Cre12.g517050 2.0kb downstream 2.0kb downstream 4570 true chromosome_12: 4017682-4022251 Chlamydomonas reinhardtii
Cre12.g517050 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 4017682-4019681 Chlamydomonas reinhardtii
Cre12.g517050 5.0kb upstream 5.0kb upstream 7570 true chromosome_12: 4019682-4027251 Chlamydomonas reinhardtii
Cre12.g517050 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 4022252-4027251 Chlamydomonas reinhardtii
Cre12.g517050 5.0kb downstream 5.0kb downstream 7570 true chromosome_12: 4014682-4022251 Chlamydomonas reinhardtii
Cre12.g517050 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 4014682-4019681 Chlamydomonas reinhardtii
Cre12.g517050 10.0kb upstream 10.0kb upstream 12570 true chromosome_12: 4019682-4032251 Chlamydomonas reinhardtii
Cre12.g517050 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 4022252-4032251 Chlamydomonas reinhardtii
Cre12.g517050 10.0kb downstream 10.0kb downstream 12570 true chromosome_12: 4009682-4022251 Chlamydomonas reinhardtii
Cre12.g517050 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 4009682-4019681 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124093961 5260 Chlorophyte View MSA
123410948 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.312       Low
cufflinks 9.044        
cufflinks 15.657     High High
cufflinks 19.608     High High
cufflinks 6.854        
cufflinks 7.369        
cufflinks 6.125        
cufflinks 10.503        
cufflinks 3.128       Low
cufflinks 4.345        
cufflinks 26.774     High High
cufflinks 9.715        
cufflinks 4.685        
cufflinks 9.228        
cufflinks 10.389        
cufflinks 4.316        
cufflinks 4.615        
cufflinks 10.36        
cufflinks 1.922       Low
cufflinks 6.63        
cufflinks 10.785        
cufflinks 3.867        
cufflinks 4.939        
cufflinks 10.624        
cufflinks 3.852        
cufflinks 14.025 1.66345 26.3866   Low
cufflinks 9.20849 2.31099 16.106   Low
cufflinks 25.7714 0.0 52.1175    
cufflinks 9.16077 1.4163 16.9053    
cufflinks 25.2981 4.32275 46.2734   High

0 Strain