Gene : Cre12.g515350 C. reinhardtii v5.6
Defline:  (1 of 1) PF00415//PF08016//PF09458//PF13540 - Regulator of chromosome condensation (RCC1) repeat (RCC1) // Polycystin cation channel (PKD_channel) // H-type lectin domain (H_lectin) // Regulator of chromosome condensation (RCC1) repeat (RCC1_2) Genomic Order:  699
Name:  ? Cre12.g515350 Secondary Identifier:  ? PAC:30791859
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g515350 0.5kb upstream 0.5kb upstream 29412 true chromosome_12: 3790152-3819563 Chlamydomonas reinhardtii
Cre12.g515350 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 3790152-3790651 Chlamydomonas reinhardtii
Cre12.g515350 0.5kb downstream 0.5kb downstream 29412 true chromosome_12: 3790652-3820063 Chlamydomonas reinhardtii
Cre12.g515350 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 3819564-3820063 Chlamydomonas reinhardtii
Cre12.g515350 1.0kb upstream 1.0kb upstream 29912 true chromosome_12: 3789652-3819563 Chlamydomonas reinhardtii
Cre12.g515350 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 3789652-3790651 Chlamydomonas reinhardtii
Cre12.g515350 1.0kb downstream 1.0kb downstream 29912 true chromosome_12: 3790652-3820563 Chlamydomonas reinhardtii
Cre12.g515350 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 3819564-3820563 Chlamydomonas reinhardtii
Cre12.g515350 2.0kb upstream 2.0kb upstream 30912 true chromosome_12: 3788652-3819563 Chlamydomonas reinhardtii
Cre12.g515350 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 3788652-3790651 Chlamydomonas reinhardtii
Cre12.g515350 2.0kb downstream 2.0kb downstream 30912 true chromosome_12: 3790652-3821563 Chlamydomonas reinhardtii
Cre12.g515350 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 3819564-3821563 Chlamydomonas reinhardtii
Cre12.g515350 5.0kb upstream 5.0kb upstream 33912 true chromosome_12: 3785652-3819563 Chlamydomonas reinhardtii
Cre12.g515350 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 3785652-3790651 Chlamydomonas reinhardtii
Cre12.g515350 5.0kb downstream 5.0kb downstream 33912 true chromosome_12: 3790652-3824563 Chlamydomonas reinhardtii
Cre12.g515350 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 3819564-3824563 Chlamydomonas reinhardtii
Cre12.g515350 10.0kb upstream 10.0kb upstream 38912 true chromosome_12: 3780652-3819563 Chlamydomonas reinhardtii
Cre12.g515350 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 3780652-3790651 Chlamydomonas reinhardtii
Cre12.g515350 10.0kb downstream 10.0kb downstream 38912 true chromosome_12: 3790652-3829563 Chlamydomonas reinhardtii
Cre12.g515350 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 3819564-3829563 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081564 5260 Chlorophyte View MSA
123399286 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.016     Low Low
cufflinks 0.07     Low  
cufflinks 0.092     Low  
cufflinks 0.131     Low  
cufflinks 0.056     Low  
cufflinks 0.065     Low  
cufflinks 0.112     Low  
cufflinks 0.166     Low High
cufflinks 0.018     Low Low
cufflinks 0.034     Low  
cufflinks 0.153     Low High
cufflinks 0.137     Low  
cufflinks 0.057     Low  
cufflinks 0.054     Low  
cufflinks 0.103     Low  
cufflinks 0.019     Low Low
cufflinks 0.069     Low  
cufflinks 0.087     Low  
cufflinks 0.03     Low Low
cufflinks 0.224       High
cufflinks 0.11     Low  
cufflinks 0.023     Low Low
cufflinks 0.178     Low High
cufflinks 0.148     Low  
cufflinks 0.041     Low  
cufflinks 1.14817 0.0 2.31523    
cufflinks 0.210676 0.0 0.469683 Low  
cufflinks 2.41559 0.0 4.85559    
cufflinks 1.36558 0.168175 2.56299    
cufflinks 2.6599 0.474846 4.84496    

0 Strain