Gene : Cre12.g509200 C. reinhardtii v5.6
Defline:  (1 of 1) PF03935 - Beta-glucan synthesis-associated protein (SKN1) (SKN1) Genomic Order:  358
Name:  ? Cre12.g509200 Secondary Identifier:  ? PAC:30793326
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g509200 0.5kb upstream 0.5kb upstream 5162 true chromosome_12: 2103906-2109067 Chlamydomonas reinhardtii
Cre12.g509200 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 2103906-2104405 Chlamydomonas reinhardtii
Cre12.g509200 0.5kb downstream 0.5kb downstream 5162 true chromosome_12: 2104406-2109567 Chlamydomonas reinhardtii
Cre12.g509200 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 2109068-2109567 Chlamydomonas reinhardtii
Cre12.g509200 1.0kb upstream 1.0kb upstream 5662 true chromosome_12: 2103406-2109067 Chlamydomonas reinhardtii
Cre12.g509200 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 2103406-2104405 Chlamydomonas reinhardtii
Cre12.g509200 1.0kb downstream 1.0kb downstream 5662 true chromosome_12: 2104406-2110067 Chlamydomonas reinhardtii
Cre12.g509200 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 2109068-2110067 Chlamydomonas reinhardtii
Cre12.g509200 2.0kb upstream 2.0kb upstream 6662 true chromosome_12: 2102406-2109067 Chlamydomonas reinhardtii
Cre12.g509200 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 2102406-2104405 Chlamydomonas reinhardtii
Cre12.g509200 2.0kb downstream 2.0kb downstream 6662 true chromosome_12: 2104406-2111067 Chlamydomonas reinhardtii
Cre12.g509200 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 2109068-2111067 Chlamydomonas reinhardtii
Cre12.g509200 5.0kb upstream 5.0kb upstream 9662 true chromosome_12: 2099406-2109067 Chlamydomonas reinhardtii
Cre12.g509200 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 2099406-2104405 Chlamydomonas reinhardtii
Cre12.g509200 5.0kb downstream 5.0kb downstream 9662 true chromosome_12: 2104406-2114067 Chlamydomonas reinhardtii
Cre12.g509200 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 2109068-2114067 Chlamydomonas reinhardtii
Cre12.g509200 10.0kb upstream 10.0kb upstream 14662 true chromosome_12: 2094406-2109067 Chlamydomonas reinhardtii
Cre12.g509200 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 2094406-2104405 Chlamydomonas reinhardtii
Cre12.g509200 10.0kb downstream 10.0kb downstream 14662 true chromosome_12: 2104406-2119067 Chlamydomonas reinhardtii
Cre12.g509200 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 2109068-2119067 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094360 5260 Chlorophyte View MSA
123411216 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.95       Low
cufflinks 4.768        
cufflinks 10.13       High
cufflinks 11.027       High
cufflinks 3.395        
cufflinks 4.8        
cufflinks 3.999        
cufflinks 6.8        
cufflinks 2.736        
cufflinks 1.911       Low
cufflinks 14.66     High High
cufflinks 6.317        
cufflinks 3.133        
cufflinks 5.611        
cufflinks 6.721        
cufflinks 3.605        
cufflinks 3.029        
cufflinks 4.137        
cufflinks 2.549       Low
cufflinks 7.604        
cufflinks 7.933        
cufflinks 2.831        
cufflinks 4.972        
cufflinks 6.807        
cufflinks 2.967        
cufflinks 3.10289 0.432956 5.77283   High
cufflinks 12.8401 3.49714 22.183    
cufflinks 10.1989 0.0 20.5108    
cufflinks 6.52093 1.05433 11.9875   High
cufflinks 5.193 0.926389 9.45962   Low

0 Strain