Gene : FAP238 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g509350 Defline:  Flagellar Associated Protein 238
Genomic Order:  355 Name:  ? Cre12.g509350
Secondary Identifier:  ? PAC:30792656
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g509350 0.5kb upstream 0.5kb upstream 3162 true chromosome_12: 2095796-2098957 Chlamydomonas reinhardtii
Cre12.g509350 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 2095796-2096295 Chlamydomonas reinhardtii
Cre12.g509350 0.5kb downstream 0.5kb downstream 3162 true chromosome_12: 2096296-2099457 Chlamydomonas reinhardtii
Cre12.g509350 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 2098958-2099457 Chlamydomonas reinhardtii
Cre12.g509350 1.0kb upstream 1.0kb upstream 3662 true chromosome_12: 2095296-2098957 Chlamydomonas reinhardtii
Cre12.g509350 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 2095296-2096295 Chlamydomonas reinhardtii
Cre12.g509350 1.0kb downstream 1.0kb downstream 3662 true chromosome_12: 2096296-2099957 Chlamydomonas reinhardtii
Cre12.g509350 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 2098958-2099957 Chlamydomonas reinhardtii
Cre12.g509350 2.0kb upstream 2.0kb upstream 4662 true chromosome_12: 2094296-2098957 Chlamydomonas reinhardtii
Cre12.g509350 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 2094296-2096295 Chlamydomonas reinhardtii
Cre12.g509350 2.0kb downstream 2.0kb downstream 4662 true chromosome_12: 2096296-2100957 Chlamydomonas reinhardtii
Cre12.g509350 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 2098958-2100957 Chlamydomonas reinhardtii
Cre12.g509350 5.0kb upstream 5.0kb upstream 7662 true chromosome_12: 2091296-2098957 Chlamydomonas reinhardtii
Cre12.g509350 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 2091296-2096295 Chlamydomonas reinhardtii
Cre12.g509350 5.0kb downstream 5.0kb downstream 7662 true chromosome_12: 2096296-2103957 Chlamydomonas reinhardtii
Cre12.g509350 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 2098958-2103957 Chlamydomonas reinhardtii
Cre12.g509350 10.0kb upstream 10.0kb upstream 12662 true chromosome_12: 2086296-2098957 Chlamydomonas reinhardtii
Cre12.g509350 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 2086296-2096295 Chlamydomonas reinhardtii
Cre12.g509350 10.0kb downstream 10.0kb downstream 12662 true chromosome_12: 2096296-2108957 Chlamydomonas reinhardtii
Cre12.g509350 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 2098958-2108957 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124093541 5260 Chlorophyte View MSA
123410658 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.309        
cufflinks 9.543        
cufflinks 16.681     High  
cufflinks 27.946     High High
cufflinks 7.918        
cufflinks 8.468        
cufflinks 10.074        
cufflinks 13.697        
cufflinks 6.608        
cufflinks 3.691       Low
cufflinks 42.966     High High
cufflinks 13.025        
cufflinks 5.056       Low
cufflinks 7.897        
cufflinks 20.548     High High
cufflinks 7.865        
cufflinks 7.02        
cufflinks 11.834        
cufflinks 4.84       Low
cufflinks 10.479        
cufflinks 18.109     High High
cufflinks 7.341        
cufflinks 10.545        
cufflinks 16.348     High  
cufflinks 7.179        
cufflinks 14.1844 1.42918 26.9397   High
cufflinks 13.4948 3.67547 23.3142    
cufflinks 11.044 0.0 22.2011   Low
cufflinks 8.72906 1.27013 16.188    
cufflinks 15.7508 3.03517 28.4665    

0 Strain