Gene : FAP286 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g509800 Defline:  Coiled-Coil Flagellar Associated Protein 286
Genomic Order:  346 Name:  ? Cre12.g509800
Secondary Identifier:  ? PAC:30792856
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g509800 0.5kb upstream 0.5kb upstream 2265 true chromosome_12: 2056092-2058356 Chlamydomonas reinhardtii
Cre12.g509800 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 2057857-2058356 Chlamydomonas reinhardtii
Cre12.g509800 0.5kb downstream 0.5kb downstream 2265 true chromosome_12: 2055592-2057856 Chlamydomonas reinhardtii
Cre12.g509800 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 2055592-2056091 Chlamydomonas reinhardtii
Cre12.g509800 1.0kb upstream 1.0kb upstream 2765 true chromosome_12: 2056092-2058856 Chlamydomonas reinhardtii
Cre12.g509800 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 2057857-2058856 Chlamydomonas reinhardtii
Cre12.g509800 1.0kb downstream 1.0kb downstream 2765 true chromosome_12: 2055092-2057856 Chlamydomonas reinhardtii
Cre12.g509800 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 2055092-2056091 Chlamydomonas reinhardtii
Cre12.g509800 2.0kb upstream 2.0kb upstream 3765 true chromosome_12: 2056092-2059856 Chlamydomonas reinhardtii
Cre12.g509800 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 2057857-2059856 Chlamydomonas reinhardtii
Cre12.g509800 2.0kb downstream 2.0kb downstream 3765 true chromosome_12: 2054092-2057856 Chlamydomonas reinhardtii
Cre12.g509800 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 2054092-2056091 Chlamydomonas reinhardtii
Cre12.g509800 5.0kb upstream 5.0kb upstream 6765 true chromosome_12: 2056092-2062856 Chlamydomonas reinhardtii
Cre12.g509800 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 2057857-2062856 Chlamydomonas reinhardtii
Cre12.g509800 5.0kb downstream 5.0kb downstream 6765 true chromosome_12: 2051092-2057856 Chlamydomonas reinhardtii
Cre12.g509800 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 2051092-2056091 Chlamydomonas reinhardtii
Cre12.g509800 10.0kb upstream 10.0kb upstream 11765 true chromosome_12: 2056092-2067856 Chlamydomonas reinhardtii
Cre12.g509800 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 2057857-2067856 Chlamydomonas reinhardtii
Cre12.g509800 10.0kb downstream 10.0kb downstream 11765 true chromosome_12: 2046092-2057856 Chlamydomonas reinhardtii
Cre12.g509800 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 2046092-2056091 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124093939 5260 Chlorophyte View MSA
123410930 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.242       Low
cufflinks 10.867        
cufflinks 19.219     High  
cufflinks 25.828     High High
cufflinks 8.674        
cufflinks 10.703        
cufflinks 13.422        
cufflinks 14.494        
cufflinks 2.57       Low
cufflinks 7.687     High  
cufflinks 31.427     High High
cufflinks 14.095        
cufflinks 11.024     High  
cufflinks 11.186        
cufflinks 19.95     High  
cufflinks 3.212       Low
cufflinks 5.131        
cufflinks 12.557        
cufflinks 6.101     High  
cufflinks 17.49     High  
cufflinks 13.77     High  
cufflinks 4.631       Low
cufflinks 16.651     High  
cufflinks 15.809     High  
cufflinks 3.146       Low
cufflinks 2.30365 0.127165 4.48014    
cufflinks 5.55175 0.85267 10.2508    
cufflinks 12.4962 0.0 25.138    
cufflinks 5.92168 0.968505 10.8749    
cufflinks 7.85094 1.38398 14.3179    

0 Strain