Gene : PHC41 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g506750 Defline:  (1 of 70) PF12499 - Pherophorin (DUF3707)
Genomic Order:  423 Name:  ? Cre12.g506750
Secondary Identifier:  ? PAC:30791871
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g506750 0.5kb upstream 0.5kb upstream 8536 true chromosome_12: 2463822-2472357 Chlamydomonas reinhardtii
Cre12.g506750 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 2471858-2472357 Chlamydomonas reinhardtii
Cre12.g506750 0.5kb downstream 0.5kb downstream 8536 true chromosome_12: 2463322-2471857 Chlamydomonas reinhardtii
Cre12.g506750 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 2463322-2463821 Chlamydomonas reinhardtii
Cre12.g506750 1.0kb upstream 1.0kb upstream 9036 true chromosome_12: 2463822-2472857 Chlamydomonas reinhardtii
Cre12.g506750 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 2471858-2472857 Chlamydomonas reinhardtii
Cre12.g506750 1.0kb downstream 1.0kb downstream 9036 true chromosome_12: 2462822-2471857 Chlamydomonas reinhardtii
Cre12.g506750 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 2462822-2463821 Chlamydomonas reinhardtii
Cre12.g506750 2.0kb upstream 2.0kb upstream 10036 true chromosome_12: 2463822-2473857 Chlamydomonas reinhardtii
Cre12.g506750 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 2471858-2473857 Chlamydomonas reinhardtii
Cre12.g506750 2.0kb downstream 2.0kb downstream 10036 true chromosome_12: 2461822-2471857 Chlamydomonas reinhardtii
Cre12.g506750 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 2461822-2463821 Chlamydomonas reinhardtii
Cre12.g506750 5.0kb upstream 5.0kb upstream 13036 true chromosome_12: 2463822-2476857 Chlamydomonas reinhardtii
Cre12.g506750 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 2471858-2476857 Chlamydomonas reinhardtii
Cre12.g506750 5.0kb downstream 5.0kb downstream 13036 true chromosome_12: 2458822-2471857 Chlamydomonas reinhardtii
Cre12.g506750 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 2458822-2463821 Chlamydomonas reinhardtii
Cre12.g506750 10.0kb upstream 10.0kb upstream 18036 true chromosome_12: 2463822-2481857 Chlamydomonas reinhardtii
Cre12.g506750 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 2471858-2481857 Chlamydomonas reinhardtii
Cre12.g506750 10.0kb downstream 10.0kb downstream 18036 true chromosome_12: 2453822-2471857 Chlamydomonas reinhardtii
Cre12.g506750 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 2453822-2463821 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081414 5260 Chlorophyte View MSA
123399144 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.887        
cufflinks 15.104     High  
cufflinks 17.772     High  
cufflinks 13.376        
cufflinks 6.628        
cufflinks 17.682     High  
cufflinks 1.983        
cufflinks 17.475     High  
cufflinks 1.948        
cufflinks 0.843        
cufflinks 2.512        
cufflinks 13.047        
cufflinks 5.13        
cufflinks 3.153        
cufflinks 12.356        
cufflinks 0.733        
cufflinks 1.694        
cufflinks 16.126     High  
cufflinks 0.003     Low Low
cufflinks 0.009     Low Low
cufflinks 4.99        
cufflinks 4.66        
cufflinks 14.302     High  
cufflinks 6.474        
cufflinks 5.132        
cufflinks 0.0795473 0.0 0.193737 Low  
cufflinks 3.61368 0.59645 6.63092    
cufflinks 2.05107 0.0 4.50192    
cufflinks 0.0637383 0.0 0.159309 Low  
cufflinks 6.46528 1.29431 11.6362    

0 Strain