Gene : FAP182 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g485000 Defline:  (1 of 2) PTHR20899:SF1 - UPF0691 PROTEIN C9ORF116
Genomic Order:  35 Name:  ? Cre12.g485000
Secondary Identifier:  ? PAC:30793329
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g485000 0.5kb upstream 0.5kb upstream 2836 true chromosome_12: 220168-223003 Chlamydomonas reinhardtii
Cre12.g485000 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 222504-223003 Chlamydomonas reinhardtii
Cre12.g485000 0.5kb downstream 0.5kb downstream 2836 true chromosome_12: 219668-222503 Chlamydomonas reinhardtii
Cre12.g485000 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 219668-220167 Chlamydomonas reinhardtii
Cre12.g485000 1.0kb upstream 1.0kb upstream 3336 true chromosome_12: 220168-223503 Chlamydomonas reinhardtii
Cre12.g485000 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 222504-223503 Chlamydomonas reinhardtii
Cre12.g485000 1.0kb downstream 1.0kb downstream 3336 true chromosome_12: 219168-222503 Chlamydomonas reinhardtii
Cre12.g485000 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 219168-220167 Chlamydomonas reinhardtii
Cre12.g485000 2.0kb upstream 2.0kb upstream 4336 true chromosome_12: 220168-224503 Chlamydomonas reinhardtii
Cre12.g485000 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 222504-224503 Chlamydomonas reinhardtii
Cre12.g485000 2.0kb downstream 2.0kb downstream 4336 true chromosome_12: 218168-222503 Chlamydomonas reinhardtii
Cre12.g485000 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 218168-220167 Chlamydomonas reinhardtii
Cre12.g485000 5.0kb upstream 5.0kb upstream 7336 true chromosome_12: 220168-227503 Chlamydomonas reinhardtii
Cre12.g485000 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 222504-227503 Chlamydomonas reinhardtii
Cre12.g485000 5.0kb downstream 5.0kb downstream 7336 true chromosome_12: 215168-222503 Chlamydomonas reinhardtii
Cre12.g485000 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 215168-220167 Chlamydomonas reinhardtii
Cre12.g485000 10.0kb upstream 10.0kb upstream 12336 true chromosome_12: 220168-232503 Chlamydomonas reinhardtii
Cre12.g485000 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 222504-232503 Chlamydomonas reinhardtii
Cre12.g485000 10.0kb downstream 10.0kb downstream 12336 true chromosome_12: 210168-222503 Chlamydomonas reinhardtii
Cre12.g485000 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 210168-220167 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110279 5260 Chlorophyte View MSA
123423066 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.174        
cufflinks 7.309        
cufflinks 24.072     High High
cufflinks 29.391     High High
cufflinks 4.752        
cufflinks 5.49        
cufflinks 6.417        
cufflinks 10.654        
cufflinks 3.099        
cufflinks 3.634        
cufflinks 59.022     High High
cufflinks 8.737        
cufflinks 5.848        
cufflinks 5.481        
cufflinks 22.959     High High
cufflinks 2.281       Low
cufflinks 3.048       Low
cufflinks 11.357        
cufflinks 2.854       Low
cufflinks 6.49        
cufflinks 21.01     High High
cufflinks 4.742        
cufflinks 4.749        
cufflinks 18.146     High High
cufflinks 2.796       Low
cufflinks 4.12048 0.473374 7.76758    
cufflinks 14.3435 3.67408 25.013    
cufflinks 19.4738 0.0 39.1396    
cufflinks 10.2398 1.68934 18.7903    
cufflinks 12.8838 2.56198 23.2056    

0 Strain