Gene : FAP271 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g486700 Defline:  (1 of 4) PTHR21580 - SHIPPO-1-RELATED
Genomic Order:  254 Name:  ? Cre12.g486700
Secondary Identifier:  ? PAC:30793027
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g486700 0.5kb upstream 0.5kb upstream 4020 true chromosome_12: 1563531-1567550 Chlamydomonas reinhardtii
Cre12.g486700 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 1567051-1567550 Chlamydomonas reinhardtii
Cre12.g486700 0.5kb downstream 0.5kb downstream 4020 true chromosome_12: 1563031-1567050 Chlamydomonas reinhardtii
Cre12.g486700 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 1563031-1563530 Chlamydomonas reinhardtii
Cre12.g486700 1.0kb upstream 1.0kb upstream 4520 true chromosome_12: 1563531-1568050 Chlamydomonas reinhardtii
Cre12.g486700 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 1567051-1568050 Chlamydomonas reinhardtii
Cre12.g486700 1.0kb downstream 1.0kb downstream 4520 true chromosome_12: 1562531-1567050 Chlamydomonas reinhardtii
Cre12.g486700 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 1562531-1563530 Chlamydomonas reinhardtii
Cre12.g486700 2.0kb upstream 2.0kb upstream 5520 true chromosome_12: 1563531-1569050 Chlamydomonas reinhardtii
Cre12.g486700 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 1567051-1569050 Chlamydomonas reinhardtii
Cre12.g486700 2.0kb downstream 2.0kb downstream 5520 true chromosome_12: 1561531-1567050 Chlamydomonas reinhardtii
Cre12.g486700 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 1561531-1563530 Chlamydomonas reinhardtii
Cre12.g486700 5.0kb upstream 5.0kb upstream 8520 true chromosome_12: 1563531-1572050 Chlamydomonas reinhardtii
Cre12.g486700 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 1567051-1572050 Chlamydomonas reinhardtii
Cre12.g486700 5.0kb downstream 5.0kb downstream 8520 true chromosome_12: 1558531-1567050 Chlamydomonas reinhardtii
Cre12.g486700 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 1558531-1563530 Chlamydomonas reinhardtii
Cre12.g486700 10.0kb upstream 10.0kb upstream 13520 true chromosome_12: 1563531-1577050 Chlamydomonas reinhardtii
Cre12.g486700 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 1567051-1577050 Chlamydomonas reinhardtii
Cre12.g486700 10.0kb downstream 10.0kb downstream 13520 true chromosome_12: 1553531-1567050 Chlamydomonas reinhardtii
Cre12.g486700 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 1553531-1563530 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124093719 5260 Chlorophyte View MSA
123410772 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.623       Low
cufflinks 1.485        
cufflinks 4.282       High
cufflinks 5.496       High
cufflinks 1.038        
cufflinks 1.285        
cufflinks 1.638        
cufflinks 2.551        
cufflinks 0.642       Low
cufflinks 0.459       Low
cufflinks 10.365       High
cufflinks 2.253        
cufflinks 0.959        
cufflinks 1.227        
cufflinks 4.233       High
cufflinks 0.594       Low
cufflinks 0.871        
cufflinks 2.205        
cufflinks 0.629       Low
cufflinks 2.934        
cufflinks 3.021        
cufflinks 0.793        
cufflinks 1.528        
cufflinks 3.443        
cufflinks 0.494       Low
cufflinks 0.675531 0.0 1.43023    
cufflinks 3.21124 0.0465372 6.37594   Low
cufflinks 5.58295 0.0 13.8226    
cufflinks 3.8621 0.224959 7.49923    
cufflinks 5.23634 0.0 10.8587    

0 Strain