Gene : MDN4 C. reinhardtii v5.6
Primary Identifier:  ? Cre12.g483950 Defline:  (1 of 3) K00026 - malate dehydrogenase (MDH2)
Genomic Order:  13 Name:  ? Cre12.g483950
Secondary Identifier:  ? PAC:30793306
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii GLUCONEO-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii GLYOXYLATE-BYPASS Chlamydomonas reinhardtii pathologic  
Creinhardtii P23-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5464 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-561 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5690 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY66-399 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7115 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre12.g483950 0.5kb upstream 0.5kb upstream 3122 true chromosome_12: 91926-95047 Chlamydomonas reinhardtii
Cre12.g483950 0.5kb upstream 0.5kb upstream 500 false chromosome_12: 91926-92425 Chlamydomonas reinhardtii
Cre12.g483950 0.5kb downstream 0.5kb downstream 3122 true chromosome_12: 92426-95547 Chlamydomonas reinhardtii
Cre12.g483950 0.5kb downstream 0.5kb downstream 500 false chromosome_12: 95048-95547 Chlamydomonas reinhardtii
Cre12.g483950 1.0kb upstream 1.0kb upstream 3622 true chromosome_12: 91426-95047 Chlamydomonas reinhardtii
Cre12.g483950 1.0kb upstream 1.0kb upstream 1000 false chromosome_12: 91426-92425 Chlamydomonas reinhardtii
Cre12.g483950 1.0kb downstream 1.0kb downstream 3622 true chromosome_12: 92426-96047 Chlamydomonas reinhardtii
Cre12.g483950 1.0kb downstream 1.0kb downstream 1000 false chromosome_12: 95048-96047 Chlamydomonas reinhardtii
Cre12.g483950 2.0kb upstream 2.0kb upstream 4622 true chromosome_12: 90426-95047 Chlamydomonas reinhardtii
Cre12.g483950 2.0kb upstream 2.0kb upstream 2000 false chromosome_12: 90426-92425 Chlamydomonas reinhardtii
Cre12.g483950 2.0kb downstream 2.0kb downstream 4622 true chromosome_12: 92426-97047 Chlamydomonas reinhardtii
Cre12.g483950 2.0kb downstream 2.0kb downstream 2000 false chromosome_12: 95048-97047 Chlamydomonas reinhardtii
Cre12.g483950 5.0kb upstream 5.0kb upstream 7622 true chromosome_12: 87426-95047 Chlamydomonas reinhardtii
Cre12.g483950 5.0kb upstream 5.0kb upstream 5000 false chromosome_12: 87426-92425 Chlamydomonas reinhardtii
Cre12.g483950 5.0kb downstream 5.0kb downstream 7622 true chromosome_12: 92426-100047 Chlamydomonas reinhardtii
Cre12.g483950 5.0kb downstream 5.0kb downstream 5000 false chromosome_12: 95048-100047 Chlamydomonas reinhardtii
Cre12.g483950 10.0kb upstream 10.0kb upstream 12622 true chromosome_12: 82426-95047 Chlamydomonas reinhardtii
Cre12.g483950 10.0kb upstream 10.0kb upstream 10000 false chromosome_12: 82426-92425 Chlamydomonas reinhardtii
Cre12.g483950 10.0kb downstream 10.0kb downstream 12622 true chromosome_12: 92426-105047 Chlamydomonas reinhardtii
Cre12.g483950 10.0kb downstream 10.0kb downstream 10000 false chromosome_12: 95048-105047 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108575 5260 Chlorophyte View MSA
123423974 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 100.517     High Low
cufflinks 260.889     High  
cufflinks 293.977     High High
cufflinks 203.946     High  
cufflinks 260.953     High  
cufflinks 261.001     High  
cufflinks 230.457     High  
cufflinks 237.67     High  
cufflinks 123.563     High Low
cufflinks 232.074     High  
cufflinks 165.752     High  
cufflinks 188.266     High  
cufflinks 293.719     High High
cufflinks 251.706     High  
cufflinks 203.732     High  
cufflinks 107.729     High Low
cufflinks 125.168     High Low
cufflinks 279.827     High High
cufflinks 135.352     High  
cufflinks 101.892     High Low
cufflinks 205.146     High  
cufflinks 89.087     High Low
cufflinks 186.811     High  
cufflinks 210.707     High  
cufflinks 120.555     High Low
cufflinks 204.601 0.0 418.798 High  
cufflinks 224.281 36.6106 411.952 High  
cufflinks 334.26 0.0 706.095 High High
cufflinks 208.95 0.0 427.537 High  
cufflinks 287.091 1.88654 572.295 High  

0 Strain