Gene : Cre11.g480250 C. reinhardtii v5.6
Defline:  (1 of 1) KOG4569 - Predicted lipase Genomic Order:  461
Name:  ? Cre11.g480250 Secondary Identifier:  ? PAC:30775597
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g480250 0.5kb upstream 0.5kb upstream 7683 true chromosome_11: 3321053-3328735 Chlamydomonas reinhardtii
Cre11.g480250 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 3328236-3328735 Chlamydomonas reinhardtii
Cre11.g480250 0.5kb downstream 0.5kb downstream 7683 true chromosome_11: 3320553-3328235 Chlamydomonas reinhardtii
Cre11.g480250 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 3320553-3321052 Chlamydomonas reinhardtii
Cre11.g480250 1.0kb upstream 1.0kb upstream 8183 true chromosome_11: 3321053-3329235 Chlamydomonas reinhardtii
Cre11.g480250 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 3328236-3329235 Chlamydomonas reinhardtii
Cre11.g480250 1.0kb downstream 1.0kb downstream 8183 true chromosome_11: 3320053-3328235 Chlamydomonas reinhardtii
Cre11.g480250 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 3320053-3321052 Chlamydomonas reinhardtii
Cre11.g480250 2.0kb upstream 2.0kb upstream 9183 true chromosome_11: 3321053-3330235 Chlamydomonas reinhardtii
Cre11.g480250 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 3328236-3330235 Chlamydomonas reinhardtii
Cre11.g480250 2.0kb downstream 2.0kb downstream 9183 true chromosome_11: 3319053-3328235 Chlamydomonas reinhardtii
Cre11.g480250 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 3319053-3321052 Chlamydomonas reinhardtii
Cre11.g480250 5.0kb upstream 5.0kb upstream 12183 true chromosome_11: 3321053-3333235 Chlamydomonas reinhardtii
Cre11.g480250 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 3328236-3333235 Chlamydomonas reinhardtii
Cre11.g480250 5.0kb downstream 5.0kb downstream 12183 true chromosome_11: 3316053-3328235 Chlamydomonas reinhardtii
Cre11.g480250 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 3316053-3321052 Chlamydomonas reinhardtii
Cre11.g480250 10.0kb upstream 10.0kb upstream 17183 true chromosome_11: 3321053-3338235 Chlamydomonas reinhardtii
Cre11.g480250 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 3328236-3338235 Chlamydomonas reinhardtii
Cre11.g480250 10.0kb downstream 10.0kb downstream 17183 true chromosome_11: 3311053-3328235 Chlamydomonas reinhardtii
Cre11.g480250 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 3311053-3321052 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076610 5260 Chlorophyte Singleton cluster - no MSA
123394691 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.855        
cufflinks 10.82     High High
cufflinks 7.326       High
cufflinks 3.795        
cufflinks 5.864        
cufflinks 3.824        
cufflinks 3.838        
cufflinks 2.445        
cufflinks 9.944       High
cufflinks 3.747        
cufflinks 2.073        
cufflinks 2.255        
cufflinks 1.153        
cufflinks 5.52        
cufflinks 1.345        
cufflinks 5.536        
cufflinks 6.221        
cufflinks 4.643        
cufflinks 0.286       Low
cufflinks 0.949       Low
cufflinks 1.964        
cufflinks 5.514        
cufflinks 0.553       Low
cufflinks 0.8       Low
cufflinks 4.12        
cufflinks 6.96545 0.539195 13.3917 High High
cufflinks 30.7678 7.00299 54.5325 High  
cufflinks 1.38329 0.0 3.24819   Low
cufflinks 19.7931 0.0 41.0338   High
cufflinks 5.78097 0.333093 11.2289    

0 Strain