Gene : PHC39 C. reinhardtii v5.6
Primary Identifier:  ? Cre11.g480400 Defline:  (1 of 70) PF12499 - Pherophorin (DUF3707)
Genomic Order:  464 Name:  ? Cre11.g480400
Secondary Identifier:  ? PAC:30775642
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g480400 0.5kb upstream 0.5kb upstream 12576 true chromosome_11: 3348540-3361115 Chlamydomonas reinhardtii
Cre11.g480400 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 3360616-3361115 Chlamydomonas reinhardtii
Cre11.g480400 0.5kb downstream 0.5kb downstream 12576 true chromosome_11: 3348040-3360615 Chlamydomonas reinhardtii
Cre11.g480400 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 3348040-3348539 Chlamydomonas reinhardtii
Cre11.g480400 1.0kb upstream 1.0kb upstream 13076 true chromosome_11: 3348540-3361615 Chlamydomonas reinhardtii
Cre11.g480400 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 3360616-3361615 Chlamydomonas reinhardtii
Cre11.g480400 1.0kb downstream 1.0kb downstream 13076 true chromosome_11: 3347540-3360615 Chlamydomonas reinhardtii
Cre11.g480400 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 3347540-3348539 Chlamydomonas reinhardtii
Cre11.g480400 2.0kb upstream 2.0kb upstream 14076 true chromosome_11: 3348540-3362615 Chlamydomonas reinhardtii
Cre11.g480400 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 3360616-3362615 Chlamydomonas reinhardtii
Cre11.g480400 2.0kb downstream 2.0kb downstream 14076 true chromosome_11: 3346540-3360615 Chlamydomonas reinhardtii
Cre11.g480400 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 3346540-3348539 Chlamydomonas reinhardtii
Cre11.g480400 5.0kb upstream 5.0kb upstream 17076 true chromosome_11: 3348540-3365615 Chlamydomonas reinhardtii
Cre11.g480400 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 3360616-3365615 Chlamydomonas reinhardtii
Cre11.g480400 5.0kb downstream 5.0kb downstream 17076 true chromosome_11: 3343540-3360615 Chlamydomonas reinhardtii
Cre11.g480400 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 3343540-3348539 Chlamydomonas reinhardtii
Cre11.g480400 10.0kb upstream 10.0kb upstream 22076 true chromosome_11: 3348540-3370615 Chlamydomonas reinhardtii
Cre11.g480400 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 3360616-3370615 Chlamydomonas reinhardtii
Cre11.g480400 10.0kb downstream 10.0kb downstream 22076 true chromosome_11: 3338540-3360615 Chlamydomonas reinhardtii
Cre11.g480400 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 3338540-3348539 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076628 5260 Chlorophyte Singleton cluster - no MSA
123394708 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.00347211 0.0 0.0144591 Low  
cufflinks 0.168527 0.0 0.436802 Low  
cufflinks 0.0412926 0.0 0.15661 Low  
cufflinks 6.93714E-4 0.0 0.00559864 Low  
cufflinks 0.0384984 0.0 0.108536 Low  

0 Strain