Gene : Cre11.g475150 C. reinhardtii v5.6
Defline:  Similar to PKD2 Genomic Order:  344
Name:  ? Cre11.g475150 Secondary Identifier:  ? PAC:30775705
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g475150 0.5kb upstream 0.5kb upstream 4574 true chromosome_11: 2429299-2433872 Chlamydomonas reinhardtii
Cre11.g475150 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 2433373-2433872 Chlamydomonas reinhardtii
Cre11.g475150 0.5kb downstream 0.5kb downstream 4574 true chromosome_11: 2428799-2433372 Chlamydomonas reinhardtii
Cre11.g475150 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 2428799-2429298 Chlamydomonas reinhardtii
Cre11.g475150 1.0kb upstream 1.0kb upstream 5074 true chromosome_11: 2429299-2434372 Chlamydomonas reinhardtii
Cre11.g475150 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 2433373-2434372 Chlamydomonas reinhardtii
Cre11.g475150 1.0kb downstream 1.0kb downstream 5074 true chromosome_11: 2428299-2433372 Chlamydomonas reinhardtii
Cre11.g475150 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 2428299-2429298 Chlamydomonas reinhardtii
Cre11.g475150 2.0kb upstream 2.0kb upstream 6074 true chromosome_11: 2429299-2435372 Chlamydomonas reinhardtii
Cre11.g475150 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 2433373-2435372 Chlamydomonas reinhardtii
Cre11.g475150 2.0kb downstream 2.0kb downstream 6074 true chromosome_11: 2427299-2433372 Chlamydomonas reinhardtii
Cre11.g475150 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 2427299-2429298 Chlamydomonas reinhardtii
Cre11.g475150 5.0kb upstream 5.0kb upstream 9074 true chromosome_11: 2429299-2438372 Chlamydomonas reinhardtii
Cre11.g475150 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 2433373-2438372 Chlamydomonas reinhardtii
Cre11.g475150 5.0kb downstream 5.0kb downstream 9074 true chromosome_11: 2424299-2433372 Chlamydomonas reinhardtii
Cre11.g475150 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 2424299-2429298 Chlamydomonas reinhardtii
Cre11.g475150 10.0kb upstream 10.0kb upstream 14074 true chromosome_11: 2429299-2443372 Chlamydomonas reinhardtii
Cre11.g475150 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 2433373-2443372 Chlamydomonas reinhardtii
Cre11.g475150 10.0kb downstream 10.0kb downstream 14074 true chromosome_11: 2419299-2433372 Chlamydomonas reinhardtii
Cre11.g475150 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 2419299-2429298 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094031 5260 Chlorophyte View MSA
123410994 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.932        
cufflinks 7.52        
cufflinks 11.336        
cufflinks 16.616     High High
cufflinks 6.536        
cufflinks 8.43        
cufflinks 6.798        
cufflinks 11.807        
cufflinks 4.271       Low
cufflinks 2.17       Low
cufflinks 18.06     High High
cufflinks 9.253        
cufflinks 4.366       Low
cufflinks 8.235        
cufflinks 9.891        
cufflinks 5.597        
cufflinks 10.465        
cufflinks 9.373        
cufflinks 2.57       Low
cufflinks 11.806        
cufflinks 9.167        
cufflinks 10.166        
cufflinks 6.589        
cufflinks 11.486        
cufflinks 7.82        
cufflinks 13.122 1.67563 24.5684    
cufflinks 28.7424 7.6023 49.8826 High  
cufflinks 26.8482 0.0 54.2394 High  
cufflinks 12.1323 1.62548 22.6392    
cufflinks 20.9115 3.68949 38.1336   Low

0 Strain