Gene : FAP222 C. reinhardtii v5.6
Primary Identifier:  ? Cre11.g467561 Defline:  Flagellar Associated Protein 222
Genomic Order:  39 Name:  ? Cre11.g467561
Secondary Identifier:  ? PAC:30775582
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre11.g467561 0.5kb upstream 0.5kb upstream 2893 true chromosome_11: 293729-296621 Chlamydomonas reinhardtii
Cre11.g467561 0.5kb upstream 0.5kb upstream 500 false chromosome_11: 293729-294228 Chlamydomonas reinhardtii
Cre11.g467561 0.5kb downstream 0.5kb downstream 2893 true chromosome_11: 294229-297121 Chlamydomonas reinhardtii
Cre11.g467561 0.5kb downstream 0.5kb downstream 500 false chromosome_11: 296622-297121 Chlamydomonas reinhardtii
Cre11.g467561 1.0kb upstream 1.0kb upstream 3393 true chromosome_11: 293229-296621 Chlamydomonas reinhardtii
Cre11.g467561 1.0kb upstream 1.0kb upstream 1000 false chromosome_11: 293229-294228 Chlamydomonas reinhardtii
Cre11.g467561 1.0kb downstream 1.0kb downstream 3393 true chromosome_11: 294229-297621 Chlamydomonas reinhardtii
Cre11.g467561 1.0kb downstream 1.0kb downstream 1000 false chromosome_11: 296622-297621 Chlamydomonas reinhardtii
Cre11.g467561 2.0kb upstream 2.0kb upstream 4393 true chromosome_11: 292229-296621 Chlamydomonas reinhardtii
Cre11.g467561 2.0kb upstream 2.0kb upstream 2000 false chromosome_11: 292229-294228 Chlamydomonas reinhardtii
Cre11.g467561 2.0kb downstream 2.0kb downstream 4393 true chromosome_11: 294229-298621 Chlamydomonas reinhardtii
Cre11.g467561 2.0kb downstream 2.0kb downstream 2000 false chromosome_11: 296622-298621 Chlamydomonas reinhardtii
Cre11.g467561 5.0kb upstream 5.0kb upstream 7393 true chromosome_11: 289229-296621 Chlamydomonas reinhardtii
Cre11.g467561 5.0kb upstream 5.0kb upstream 5000 false chromosome_11: 289229-294228 Chlamydomonas reinhardtii
Cre11.g467561 5.0kb downstream 5.0kb downstream 7393 true chromosome_11: 294229-301621 Chlamydomonas reinhardtii
Cre11.g467561 5.0kb downstream 5.0kb downstream 5000 false chromosome_11: 296622-301621 Chlamydomonas reinhardtii
Cre11.g467561 10.0kb upstream 10.0kb upstream 12393 true chromosome_11: 284229-296621 Chlamydomonas reinhardtii
Cre11.g467561 10.0kb upstream 10.0kb upstream 10000 false chromosome_11: 284229-294228 Chlamydomonas reinhardtii
Cre11.g467561 10.0kb downstream 10.0kb downstream 12393 true chromosome_11: 294229-306621 Chlamydomonas reinhardtii
Cre11.g467561 10.0kb downstream 10.0kb downstream 10000 false chromosome_11: 296622-306621 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086361 5260 Chlorophyte View MSA
123403719 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.549        
cufflinks 12.314        
cufflinks 59.254     High High
cufflinks 83.327     High High
cufflinks 7.659        
cufflinks 11.905        
cufflinks 9.589        
cufflinks 29.784     High  
cufflinks 6.478        
cufflinks 5.992        
cufflinks 143.968     High High
cufflinks 21.888     High  
cufflinks 11.298     High  
cufflinks 9.681        
cufflinks 65.635     High High
cufflinks 3.254       Low
cufflinks 5.829        
cufflinks 28.726     High  
cufflinks 9.323     High  
cufflinks 11.244        
cufflinks 55.863     High High
cufflinks 5.621        
cufflinks 16.192     High  
cufflinks 45.942     High High
cufflinks 4.422       Low
cufflinks 5.08625 0.691723 9.48079    
cufflinks 18.8554 5.14563 32.5651    
cufflinks 43.0311 0.0 87.3731 High  
cufflinks 19.4271 2.16265 36.6915    
cufflinks 25.8749 4.56277 47.1871    

0 Strain