Gene : KAT1 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g427600 Defline:  (1 of 2) PTHR23074//PTHR23074:SF19 - AAA ATPASE // KATANIN P60 ATPASE-CONTAINING SUBUNIT A1
Genomic Order:  223 Name:  ? Cre10.g427600
Secondary Identifier:  ? PAC:30790542
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g427600 0.5kb upstream 0.5kb upstream 5396 true chromosome_10: 1317562-1322957 Chlamydomonas reinhardtii
Cre10.g427600 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 1322458-1322957 Chlamydomonas reinhardtii
Cre10.g427600 0.5kb downstream 0.5kb downstream 5396 true chromosome_10: 1317062-1322457 Chlamydomonas reinhardtii
Cre10.g427600 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 1317062-1317561 Chlamydomonas reinhardtii
Cre10.g427600 1.0kb upstream 1.0kb upstream 5896 true chromosome_10: 1317562-1323457 Chlamydomonas reinhardtii
Cre10.g427600 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 1322458-1323457 Chlamydomonas reinhardtii
Cre10.g427600 1.0kb downstream 1.0kb downstream 5896 true chromosome_10: 1316562-1322457 Chlamydomonas reinhardtii
Cre10.g427600 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 1316562-1317561 Chlamydomonas reinhardtii
Cre10.g427600 2.0kb upstream 2.0kb upstream 6896 true chromosome_10: 1317562-1324457 Chlamydomonas reinhardtii
Cre10.g427600 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 1322458-1324457 Chlamydomonas reinhardtii
Cre10.g427600 2.0kb downstream 2.0kb downstream 6896 true chromosome_10: 1315562-1322457 Chlamydomonas reinhardtii
Cre10.g427600 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 1315562-1317561 Chlamydomonas reinhardtii
Cre10.g427600 5.0kb upstream 5.0kb upstream 9896 true chromosome_10: 1317562-1327457 Chlamydomonas reinhardtii
Cre10.g427600 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 1322458-1327457 Chlamydomonas reinhardtii
Cre10.g427600 5.0kb downstream 5.0kb downstream 9896 true chromosome_10: 1312562-1322457 Chlamydomonas reinhardtii
Cre10.g427600 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 1312562-1317561 Chlamydomonas reinhardtii
Cre10.g427600 10.0kb upstream 10.0kb upstream 14896 true chromosome_10: 1317562-1332457 Chlamydomonas reinhardtii
Cre10.g427600 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 1322458-1332457 Chlamydomonas reinhardtii
Cre10.g427600 10.0kb downstream 10.0kb downstream 14896 true chromosome_10: 1307562-1322457 Chlamydomonas reinhardtii
Cre10.g427600 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 1307562-1317561 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110549 5260 Chlorophyte View MSA
123426944 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.774        
cufflinks 2.706        
cufflinks 2.086        
cufflinks 2.242        
cufflinks 2.027        
cufflinks 2.4        
cufflinks 2.189        
cufflinks 2.918        
cufflinks 2.053        
cufflinks 0.921       Low
cufflinks 1.388       Low
cufflinks 2.535        
cufflinks 2.189        
cufflinks 2.567        
cufflinks 1.99        
cufflinks 2.431        
cufflinks 2.688        
cufflinks 2.123        
cufflinks 0.468       Low
cufflinks 2.928        
cufflinks 2.112        
cufflinks 2.651        
cufflinks 2.945        
cufflinks 2.715        
cufflinks 3.145        
cufflinks 4.68169 0.793465 8.56992   High
cufflinks 6.4311 1.4924 11.3698    
cufflinks 7.74831 0.0 15.6776   High
cufflinks 3.80776 0.611949 7.00357   Low
cufflinks 5.82467 1.11681 10.5325    

0 Strain