Gene : PHC55 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g420200 Defline:  (1 of 70) PF12499 - Pherophorin (DUF3707)
Genomic Order:  63 Name:  ? Cre10.g420200
Secondary Identifier:  ? PAC:30790699
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g420200 0.5kb upstream 0.5kb upstream 5005 true chromosome_10: 319809-324813 Chlamydomonas reinhardtii
Cre10.g420200 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 324314-324813 Chlamydomonas reinhardtii
Cre10.g420200 0.5kb downstream 0.5kb downstream 5005 true chromosome_10: 319309-324313 Chlamydomonas reinhardtii
Cre10.g420200 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 319309-319808 Chlamydomonas reinhardtii
Cre10.g420200 1.0kb upstream 1.0kb upstream 5505 true chromosome_10: 319809-325313 Chlamydomonas reinhardtii
Cre10.g420200 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 324314-325313 Chlamydomonas reinhardtii
Cre10.g420200 1.0kb downstream 1.0kb downstream 5505 true chromosome_10: 318809-324313 Chlamydomonas reinhardtii
Cre10.g420200 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 318809-319808 Chlamydomonas reinhardtii
Cre10.g420200 2.0kb upstream 2.0kb upstream 6505 true chromosome_10: 319809-326313 Chlamydomonas reinhardtii
Cre10.g420200 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 324314-326313 Chlamydomonas reinhardtii
Cre10.g420200 2.0kb downstream 2.0kb downstream 6505 true chromosome_10: 317809-324313 Chlamydomonas reinhardtii
Cre10.g420200 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 317809-319808 Chlamydomonas reinhardtii
Cre10.g420200 5.0kb upstream 5.0kb upstream 9505 true chromosome_10: 319809-329313 Chlamydomonas reinhardtii
Cre10.g420200 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 324314-329313 Chlamydomonas reinhardtii
Cre10.g420200 5.0kb downstream 5.0kb downstream 9505 true chromosome_10: 314809-324313 Chlamydomonas reinhardtii
Cre10.g420200 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 314809-319808 Chlamydomonas reinhardtii
Cre10.g420200 10.0kb upstream 10.0kb upstream 14505 true chromosome_10: 319809-334313 Chlamydomonas reinhardtii
Cre10.g420200 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 324314-334313 Chlamydomonas reinhardtii
Cre10.g420200 10.0kb downstream 10.0kb downstream 14505 true chromosome_10: 309809-324313 Chlamydomonas reinhardtii
Cre10.g420200 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 309809-319808 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076094 5260 Chlorophyte View MSA
123394217 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.053     Low  
cufflinks 0.12     Low  
cufflinks 0.149     Low  
cufflinks 0.174     Low  
cufflinks 0.123     Low  
cufflinks 0.164     Low  
cufflinks 0.342        
cufflinks 0.205     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.172        
cufflinks 0.421       High
cufflinks 0.174        
cufflinks 0.195        
cufflinks 0.571       High
cufflinks 0.003     Low Low
cufflinks 0.024     Low  
cufflinks 0.087     Low  
cufflinks 0.006     Low Low
cufflinks 0.085     Low  
cufflinks 0.193        
cufflinks 0.006     Low Low
cufflinks 1.964       High
cufflinks 0.108     Low  
cufflinks 0.019     Low Low
cufflinks 0.797161 0.0 1.6217    
cufflinks 1.33672 0.0 2.92991    
cufflinks 3.77084 0.0 8.23799   High
cufflinks 0.700813 0.0 1.45385    
cufflinks 4.78572 0.828495 8.74295    

0 Strain