Gene : FAP178 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g418150 Defline:  (1 of 3) PTHR12509 - SPERMATOGENESIS-ASSOCIATED 4-RELATED
Genomic Order:  19 Name:  ? Cre10.g418150
Secondary Identifier:  ? PAC:30790396
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g418150 0.5kb upstream 0.5kb upstream 3254 true chromosome_10: 80826-84079 Chlamydomonas reinhardtii
Cre10.g418150 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 80826-81325 Chlamydomonas reinhardtii
Cre10.g418150 0.5kb downstream 0.5kb downstream 3254 true chromosome_10: 81326-84579 Chlamydomonas reinhardtii
Cre10.g418150 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 84080-84579 Chlamydomonas reinhardtii
Cre10.g418150 1.0kb upstream 1.0kb upstream 3754 true chromosome_10: 80326-84079 Chlamydomonas reinhardtii
Cre10.g418150 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 80326-81325 Chlamydomonas reinhardtii
Cre10.g418150 1.0kb downstream 1.0kb downstream 3754 true chromosome_10: 81326-85079 Chlamydomonas reinhardtii
Cre10.g418150 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 84080-85079 Chlamydomonas reinhardtii
Cre10.g418150 2.0kb upstream 2.0kb upstream 4754 true chromosome_10: 79326-84079 Chlamydomonas reinhardtii
Cre10.g418150 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 79326-81325 Chlamydomonas reinhardtii
Cre10.g418150 2.0kb downstream 2.0kb downstream 4754 true chromosome_10: 81326-86079 Chlamydomonas reinhardtii
Cre10.g418150 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 84080-86079 Chlamydomonas reinhardtii
Cre10.g418150 5.0kb upstream 5.0kb upstream 7754 true chromosome_10: 76326-84079 Chlamydomonas reinhardtii
Cre10.g418150 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 76326-81325 Chlamydomonas reinhardtii
Cre10.g418150 5.0kb downstream 5.0kb downstream 7754 true chromosome_10: 81326-89079 Chlamydomonas reinhardtii
Cre10.g418150 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 84080-89079 Chlamydomonas reinhardtii
Cre10.g418150 10.0kb upstream 10.0kb upstream 12754 true chromosome_10: 71326-84079 Chlamydomonas reinhardtii
Cre10.g418150 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 71326-81325 Chlamydomonas reinhardtii
Cre10.g418150 10.0kb downstream 10.0kb downstream 12754 true chromosome_10: 81326-94079 Chlamydomonas reinhardtii
Cre10.g418150 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 84080-94079 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111150 5260 Chlorophyte View MSA
123423230 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.145        
cufflinks 3.07        
cufflinks 13.225       High
cufflinks 18.484     High High
cufflinks 2.832        
cufflinks 3.369        
cufflinks 2.369        
cufflinks 6.155        
cufflinks 2.102        
cufflinks 1.855       Low
cufflinks 32.235     High High
cufflinks 4.758        
cufflinks 3.36        
cufflinks 3.314        
cufflinks 10.731       High
cufflinks 1.85       Low
cufflinks 2.237        
cufflinks 6.975        
cufflinks 1.536       Low
cufflinks 4.849        
cufflinks 9.816       High
cufflinks 2.265        
cufflinks 2.965        
cufflinks 10.163       High
cufflinks 1.811       Low
cufflinks 4.23765 0.400918 8.07437    
cufflinks 13.2279 3.48667 22.9692    
cufflinks 10.4836 0.0 21.4094    
cufflinks 6.89431 1.13863 12.65    
cufflinks 10.3672 1.58267 19.1518    

0 Strain