Gene : PPR5 C. reinhardtii v5.6
Primary Identifier:  ? Cre01.g068012 Defline:  (1 of 6) PF01535 - PPR repeat (PPR)
Genomic Order:  1242 Name:  ? Cre01.g068012
Secondary Identifier:  ? PAC:30789272
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre01.g068012 0.5kb upstream 0.5kb upstream 6227 true chromosome_1: 7964397-7970623 Chlamydomonas reinhardtii
Cre01.g068012 0.5kb upstream 0.5kb upstream 500 false chromosome_1: 7964397-7964896 Chlamydomonas reinhardtii
Cre01.g068012 0.5kb downstream 0.5kb downstream 6227 true chromosome_1: 7964897-7971123 Chlamydomonas reinhardtii
Cre01.g068012 0.5kb downstream 0.5kb downstream 500 false chromosome_1: 7970624-7971123 Chlamydomonas reinhardtii
Cre01.g068012 1.0kb upstream 1.0kb upstream 6727 true chromosome_1: 7963897-7970623 Chlamydomonas reinhardtii
Cre01.g068012 1.0kb upstream 1.0kb upstream 1000 false chromosome_1: 7963897-7964896 Chlamydomonas reinhardtii
Cre01.g068012 1.0kb downstream 1.0kb downstream 6727 true chromosome_1: 7964897-7971623 Chlamydomonas reinhardtii
Cre01.g068012 1.0kb downstream 1.0kb downstream 1000 false chromosome_1: 7970624-7971623 Chlamydomonas reinhardtii
Cre01.g068012 2.0kb upstream 2.0kb upstream 7727 true chromosome_1: 7962897-7970623 Chlamydomonas reinhardtii
Cre01.g068012 2.0kb upstream 2.0kb upstream 2000 false chromosome_1: 7962897-7964896 Chlamydomonas reinhardtii
Cre01.g068012 2.0kb downstream 2.0kb downstream 7727 true chromosome_1: 7964897-7972623 Chlamydomonas reinhardtii
Cre01.g068012 2.0kb downstream 2.0kb downstream 2000 false chromosome_1: 7970624-7972623 Chlamydomonas reinhardtii
Cre01.g068012 5.0kb upstream 5.0kb upstream 10727 true chromosome_1: 7959897-7970623 Chlamydomonas reinhardtii
Cre01.g068012 5.0kb upstream 5.0kb upstream 5000 false chromosome_1: 7959897-7964896 Chlamydomonas reinhardtii
Cre01.g068012 5.0kb downstream 5.0kb downstream 10727 true chromosome_1: 7964897-7975623 Chlamydomonas reinhardtii
Cre01.g068012 5.0kb downstream 5.0kb downstream 5000 false chromosome_1: 7970624-7975623 Chlamydomonas reinhardtii
Cre01.g068012 10.0kb upstream 10.0kb upstream 15727 true chromosome_1: 7954897-7970623 Chlamydomonas reinhardtii
Cre01.g068012 10.0kb upstream 10.0kb upstream 10000 false chromosome_1: 7954897-7964896 Chlamydomonas reinhardtii
Cre01.g068012 10.0kb downstream 10.0kb downstream 15727 true chromosome_1: 7964897-7980623 Chlamydomonas reinhardtii
Cre01.g068012 10.0kb downstream 10.0kb downstream 10000 false chromosome_1: 7970624-7980623 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113471 5260 Chlorophyte View MSA
123429046 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.329       Low
cufflinks 1.684        
cufflinks 2.304        
cufflinks 4.126       High
cufflinks 1.022        
cufflinks 1.04        
cufflinks 1.401        
cufflinks 2.518       High
cufflinks 0.341       Low
cufflinks 0.473       Low
cufflinks 5.341       High
cufflinks 1.869        
cufflinks 0.697        
cufflinks 1.19        
cufflinks 2.37        
cufflinks 0.435       Low
cufflinks 0.991        
cufflinks 1.625        
cufflinks 0.685        
cufflinks 1.515        
cufflinks 2.16        
cufflinks 0.797        
cufflinks 0.969        
cufflinks 2.328        
cufflinks 0.615        
cufflinks 1.41959 0.0783634 2.76082   High
cufflinks 6.48538 1.50499 11.4658    
cufflinks 5.39998 0.0 11.116    
cufflinks 4.47077 0.756637 8.18491   High
cufflinks 5.92149 1.10997 10.733    

0 Strain