Gene : PF6 C. reinhardtii v5.6
Primary Identifier:  ? Cre10.g434400 Defline:  (1 of 1) K19090 - CRISPR-associated protein Cas5t (cas5t)
Genomic Order:  370 Name:  ? Cre10.g434400
Secondary Identifier:  ? PAC:30790202
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g434400 0.5kb upstream 0.5kb upstream 9446 true chromosome_10: 2269087-2278532 Chlamydomonas reinhardtii
Cre10.g434400 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 2278033-2278532 Chlamydomonas reinhardtii
Cre10.g434400 0.5kb downstream 0.5kb downstream 9446 true chromosome_10: 2268587-2278032 Chlamydomonas reinhardtii
Cre10.g434400 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 2268587-2269086 Chlamydomonas reinhardtii
Cre10.g434400 1.0kb upstream 1.0kb upstream 9946 true chromosome_10: 2269087-2279032 Chlamydomonas reinhardtii
Cre10.g434400 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 2278033-2279032 Chlamydomonas reinhardtii
Cre10.g434400 1.0kb downstream 1.0kb downstream 9946 true chromosome_10: 2268087-2278032 Chlamydomonas reinhardtii
Cre10.g434400 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 2268087-2269086 Chlamydomonas reinhardtii
Cre10.g434400 2.0kb upstream 2.0kb upstream 10946 true chromosome_10: 2269087-2280032 Chlamydomonas reinhardtii
Cre10.g434400 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 2278033-2280032 Chlamydomonas reinhardtii
Cre10.g434400 2.0kb downstream 2.0kb downstream 10946 true chromosome_10: 2267087-2278032 Chlamydomonas reinhardtii
Cre10.g434400 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 2267087-2269086 Chlamydomonas reinhardtii
Cre10.g434400 5.0kb upstream 5.0kb upstream 13946 true chromosome_10: 2269087-2283032 Chlamydomonas reinhardtii
Cre10.g434400 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 2278033-2283032 Chlamydomonas reinhardtii
Cre10.g434400 5.0kb downstream 5.0kb downstream 13946 true chromosome_10: 2264087-2278032 Chlamydomonas reinhardtii
Cre10.g434400 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 2264087-2269086 Chlamydomonas reinhardtii
Cre10.g434400 10.0kb upstream 10.0kb upstream 18946 true chromosome_10: 2269087-2288032 Chlamydomonas reinhardtii
Cre10.g434400 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 2278033-2288032 Chlamydomonas reinhardtii
Cre10.g434400 10.0kb downstream 10.0kb downstream 18946 true chromosome_10: 2259087-2278032 Chlamydomonas reinhardtii
Cre10.g434400 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 2259087-2269086 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108608 5260 Chlorophyte View MSA
123422836 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.348       Low
cufflinks 2.135        
cufflinks 3.411       High
cufflinks 4.844       High
cufflinks 1.304        
cufflinks 1.168        
cufflinks 1.731        
cufflinks 2.236        
cufflinks 0.314       Low
cufflinks 0.756        
cufflinks 7.575       High
cufflinks 2.192        
cufflinks 0.629        
cufflinks 1.504        
cufflinks 2.816        
cufflinks 0.362       Low
cufflinks 0.365       Low
cufflinks 1.951        
cufflinks 0.65        
cufflinks 2.603        
cufflinks 2.726        
cufflinks 0.504       Low
cufflinks 1.468        
cufflinks 2.338        
cufflinks 0.305       Low
cufflinks 2.69581 0.418468 4.97315   Low
cufflinks 16.6023 4.03799 29.1665    
cufflinks 9.2986 0.0 18.7868    
cufflinks 5.78019 0.515749 11.0446    
cufflinks 7.70421 1.32422 14.0842    

0 Strain