Gene : Cre10.g436000 C. reinhardtii v5.6
Defline:  (1 of 2) PTHR10877//PTHR10877:SF135 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  404
Name:  ? Cre10.g436000 Secondary Identifier:  ? PAC:30790221
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre10.g436000 0.5kb upstream 0.5kb upstream 17393 true chromosome_10: 2457560-2474952 Chlamydomonas reinhardtii
Cre10.g436000 0.5kb upstream 0.5kb upstream 500 false chromosome_10: 2474453-2474952 Chlamydomonas reinhardtii
Cre10.g436000 0.5kb downstream 0.5kb downstream 17393 true chromosome_10: 2457060-2474452 Chlamydomonas reinhardtii
Cre10.g436000 0.5kb downstream 0.5kb downstream 500 false chromosome_10: 2457060-2457559 Chlamydomonas reinhardtii
Cre10.g436000 1.0kb upstream 1.0kb upstream 17893 true chromosome_10: 2457560-2475452 Chlamydomonas reinhardtii
Cre10.g436000 1.0kb upstream 1.0kb upstream 1000 false chromosome_10: 2474453-2475452 Chlamydomonas reinhardtii
Cre10.g436000 1.0kb downstream 1.0kb downstream 17893 true chromosome_10: 2456560-2474452 Chlamydomonas reinhardtii
Cre10.g436000 1.0kb downstream 1.0kb downstream 1000 false chromosome_10: 2456560-2457559 Chlamydomonas reinhardtii
Cre10.g436000 2.0kb upstream 2.0kb upstream 18893 true chromosome_10: 2457560-2476452 Chlamydomonas reinhardtii
Cre10.g436000 2.0kb upstream 2.0kb upstream 2000 false chromosome_10: 2474453-2476452 Chlamydomonas reinhardtii
Cre10.g436000 2.0kb downstream 2.0kb downstream 18893 true chromosome_10: 2455560-2474452 Chlamydomonas reinhardtii
Cre10.g436000 2.0kb downstream 2.0kb downstream 2000 false chromosome_10: 2455560-2457559 Chlamydomonas reinhardtii
Cre10.g436000 5.0kb upstream 5.0kb upstream 21893 true chromosome_10: 2457560-2479452 Chlamydomonas reinhardtii
Cre10.g436000 5.0kb upstream 5.0kb upstream 5000 false chromosome_10: 2474453-2479452 Chlamydomonas reinhardtii
Cre10.g436000 5.0kb downstream 5.0kb downstream 21893 true chromosome_10: 2452560-2474452 Chlamydomonas reinhardtii
Cre10.g436000 5.0kb downstream 5.0kb downstream 5000 false chromosome_10: 2452560-2457559 Chlamydomonas reinhardtii
Cre10.g436000 10.0kb upstream 10.0kb upstream 26893 true chromosome_10: 2457560-2484452 Chlamydomonas reinhardtii
Cre10.g436000 10.0kb upstream 10.0kb upstream 10000 false chromosome_10: 2474453-2484452 Chlamydomonas reinhardtii
Cre10.g436000 10.0kb downstream 10.0kb downstream 26893 true chromosome_10: 2447560-2474452 Chlamydomonas reinhardtii
Cre10.g436000 10.0kb downstream 10.0kb downstream 10000 false chromosome_10: 2447560-2457559 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094309 5260 Chlorophyte View MSA
123411176 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.012     Low Low
cufflinks 0.895        
cufflinks 1.625        
cufflinks 1.236        
cufflinks 0.336        
cufflinks 0.69        
cufflinks 1.145        
cufflinks 1.545        
cufflinks 0.037     Low Low
cufflinks 0.106       Low
cufflinks 1.233        
cufflinks 1.368        
cufflinks 0.719        
cufflinks 0.673        
cufflinks 1.304        
cufflinks 0.033     Low Low
cufflinks 0.354        
cufflinks 0.778        
cufflinks 0.116        
cufflinks 0.816        
cufflinks 0.448        
cufflinks 0.17        
cufflinks 5.078       High
cufflinks 1.054        
cufflinks 0.251        
cufflinks 1.78509 0.285391 3.28478   Low
cufflinks 0.679527 0.0 1.36606    
cufflinks 2.3428 0.0 4.72925    
cufflinks 1.5909 0.26482 2.91698   Low
cufflinks 2.85257 0.562307 5.14283   High

0 Strain